RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 DUSP10Q9Y6W6 482 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 WDR64B1ANS9 1081 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
USP46-204ENST00000503060 SLC9A1P19634 815 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 YWHABP31946 246 aaKnown RBP12.63□□□□□ -0.39
USP46-204ENST00000503060 SFNP31947 248 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 MAGEA1P43355 309 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 RAPGEF1Q13905 1077 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 PRKG1Q13976 671 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 UGCGQ16739 394 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 EXOC3L4Q17RC7 722 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 MAEAQ7L5Y9 396 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 GPR161Q8N6U8 529 aaKnown RBP12.63□□□□□ -0.39
USP46-204ENST00000503060 GPRASP2Q96D09 838 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 TEX13BQ9BXU2 312 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 AGPAT3Q9NRZ7 376 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 DMAC2Q9NW81 257 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 KLF15Q9UIH9 416 aa12.63□□□□□ -0.39
USP46-204ENST00000503060 CARNS1A5YM72 827 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 MAPTP10636 758 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 ACTN1P12814 892 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 PON1P27169 355 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 PSMC5P62195 406 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 GBP6Q6ZN66 633 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 NLRX1Q86UT6 975 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 GOLGA5Q8TBA6 731 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 AIPL1Q9NZN9 384 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 TCEAL9Q9UHQ7 104 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 MYH11P35749 1972 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 MACROD2A1Z1Q3 448 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 RBAK-RBAKDNI3L0D1 243 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 K7ENM7 598 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 PJA2O43164 708 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 TFRCP02786 760 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 ATP1A1P05023 1023 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 CLCN6P51797 869 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 GFPT1Q06210 699 aaPredicted RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 ALCAMQ13740 583 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 ASIC2Q16515 512 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 GJC2Q5T442 439 aaPredicted RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 RDM1Q8NG50 284 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 CCDC43Q96MW1 224 aaKnown RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 INPP4AQ96PE3 977 aaPredicted RBP12.62□□□□□ -0.39
USP46-204ENST00000503060 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 ACAD9Q9H845 621 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
USP46-204ENST00000503060 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 ENC1O14682 589 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 BACH1O14867 736 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 PLS3P13797 630 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 UCHL3P15374 230 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 CYP2J2P51589 502 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 MFSD4BQ5TF39 518 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 ZNF746Q6NUN9 644 aaPredicted RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 TIPINQ9BVW5 301 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 ANKEF1Q9NU02 776 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 CYP39A1Q9NYL5 469 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 HDAC6Q9UBN7 1215 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 SNCAIPQ9Y6H5 919 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 ANO9A1A5B4 782 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 TMEM150BA6NC51 233 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 KLHL33A6NCF5 533 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 NEFHP12036 1026 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 PLS1Q14651 629 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 SLC9A9Q8IVB4 645 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 POM121Q96HA1 1249 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 MOV10L1Q9BXT6 1211 aaKnown RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 SIX2Q9NPC8 291 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 A1CFQ9NQ94 594 aaKnown RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 DDX41Q9UJV9 622 aaKnown RBP12.61□□□□□ -0.39
USP46-204ENST00000503060 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
USP46-204ENST00000503060 HOXA2O43364 376 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 TACC1O75410 805 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 DDNO94850 711 aaPredicted RBP12.6□□□□□ -0.39
USP46-204ENST00000503060 ZSCAN20P17040 1043 aaPredicted RBP12.6□□□□□ -0.39
USP46-204ENST00000503060 TUBB4BP68371 445 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 KLHL30Q0D2K2 578 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms