RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CABP4P57796 275 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 CD83Q01151 205 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 PLCB3Q01970 1234 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 NFIAQ12857 509 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 PKN2Q16513 984 aaKnown RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 INO80DQ53TQ3 878 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 BRDTQ58F21 947 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 C1orf141Q5JVX7 400 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 RNASEH2BQ5TBB1 312 aaKnown RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 ANGPTL8Q6UXH0 198 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 CCDC81Q6ZN84 652 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 CCDC129Q6ZRS4 1044 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 RTL10Q7L3V2 364 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 CADM3Q8N126 398 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 BCAS4Q8TDM0 211 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 RELTQ969Z4 430 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 EFHD2Q96C19 240 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 HAUS1Q96CS2 278 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 KLRG1Q96E93 195 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 NSMCE3Q96MG7 304 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 GDAP1L1Q96MZ0 367 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 SIKE1Q9BRV8 207 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 TSEN34Q9BSV6 310 aaKnown RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 APOL5Q9BWW9 433 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 ZCWPW1Q9H0M4 648 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 GLT8D2Q9H1C3 349 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 CARD9Q9H257 536 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 NOD2Q9HC29 1040 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 SIRT5Q9NXA8 310 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 SEC63Q9UGP8 760 aaKnown RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 RAB21Q9UL25 225 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 TTF2Q9UNY4 1162 aaKnown RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 LIMCH1Q9UPQ0 1083 aa7.02□□□□□ -1.29
CLCN3-203ENST00000502998 RTCBQ9Y3I0 505 aaKnown RBP7.02□□□□□ -1.29
CLCN3-203ENST00000502998 C17orf113A0A1B0GUU1 675 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 KRBA1A5PL33 1030 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 OR6C65A6NJZ3 312 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 BECN2A8MW95 431 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CDK2AP1O14519 115 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 ZW10O43264 779 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PRPF3O43395 683 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TSC22D2O75157 780 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SEC24DO94855 1032 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 OR5F1O95221 314 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 APBB3O95704 486 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 ECDO95905 644 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 MMP10P09238 476 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 GHRP10912 638 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CDK4P11802 303 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PCNAP12004 261 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 NAGAP17050 411 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 DDX5P17844 614 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 MX1P20591 662 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CFL1P23528 166 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CCND1P24385 295 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 GBP1P32455 592 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 EVI2BP34910 448 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PSMC2P35998 433 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TXLNAP40222 546 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 ASMTP46597 345 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PLTPP55058 493 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 AP1B1Q10567 949 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TBL3Q12788 808 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TUBB2AQ13885 445 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SQLEQ14534 574 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 NR1D2Q14995 579 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PCSK7Q16549 785 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 FBXO43Q4G163 708 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TMEM259Q4ZIN3 620 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 LACTB2Q53H82 288 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 METTL24Q5JXM2 366 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PPP2R2DQ66LE6 453 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CCDC102BQ68D86 513 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 RSRC2Q7L4I2 434 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SLC44A2Q8IWA5 706 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SCUBE1Q8IWY4 988 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SIX5Q8N196 739 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 FAM149B1Q96BN6 582 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SGK3Q96BR1 496 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CDCA5Q96FF9 252 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 ZNF570Q96NI8 536 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 TUBB2BQ9BVA1 445 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 PPCSQ9HAB8 311 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CNGB3Q9NQW8 809 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 C8orf4Q9NR00 106 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 FARSBQ9NSD9 589 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 MBD2Q9UBB5 411 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 HMGXB4Q9UGU5 601 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 INTUQ9ULD6 942 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SNX8Q9Y5X2 465 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 GPC6Q9Y625 555 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 NUMBLQ9Y6R0 609 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.01□□□□□ -1.29
CLCN3-203ENST00000502998 MYO3BQ8WXR4 1341 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 CDHR2Q9BYE9 1310 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms