RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
CNOT4-211ENST00000498534 GCOM2Q9BZD3 368 aaPredicted RBP13.55□□□□□ -0.24
CNOT4-211ENST00000498534 UNC45AQ9H3U1 944 aa13.55□□□□□ -0.24
CNOT4-211ENST00000498534 CHST12Q9NRB3 414 aa13.55□□□□□ -0.24
CNOT4-211ENST00000498534 CPLX1O14810 134 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 MRE11P49959 708 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 EVCP57679 992 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 GSE1Q14687 1217 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 Q4G0T1 1027 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 XKR3Q5GH77 459 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 ANKRD54Q6NXT1 300 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 LLGL2Q6P1M3 1020 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 MRPL43Q8N983 215 aaKnown RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 TMEM87AQ8NBN3 555 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 VN1R2Q8NFZ6 395 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 SUSD6Q92537 303 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 PRRX2Q99811 253 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 NIFKQ9BYG3 293 aaKnown RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 INO80BQ9C086 356 aaPredicted RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 NCOA5Q9HCD5 579 aaKnown RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
CNOT4-211ENST00000498534 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
CNOT4-211ENST00000498534 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CYP3A7-CYP3A51PA0A087WV96 503 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CARNS1A5YM72 827 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 DDX11L8A8MPP1 907 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 HIDE1A8MVS5 230 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 PSMD10O75832 226 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 PYGBP11216 843 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 SKIP12755 728 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 FGFR4P22455 802 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CYP3A7P24462 503 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 KCNC3Q14003 757 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
CNOT4-211ENST00000498534 TARBP2Q15633 366 aaKnown RBP13.53□□□□□ -0.24
CNOT4-211ENST00000498534 UGCGQ16739 394 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CES5AQ6NT32 575 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 RUFY3Q7L099 469 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CASP10Q92851 521 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 JPH2Q9BR39 696 aaPredicted RBP13.53□□□□□ -0.24
CNOT4-211ENST00000498534 S1PR5Q9H228 398 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
CNOT4-211ENST00000498534 TECTAO75443 2155 aa13.52□□□□□ -0.24
CNOT4-211ENST00000498534 EDIL3O43854 480 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 CSDE1O75534 798 aaKnown RBP13.52□□□□□ -0.25
CNOT4-211ENST00000498534 DEXIO95424 95 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 CXCL14O95715 111 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 SFPQP23246 707 aaKnown RBP eCLIP13.52□□□□□ -0.25
CNOT4-211ENST00000498534 CA8P35219 290 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 PBX3P40426 434 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 BCAR1P56945 870 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.25
CNOT4-211ENST00000498534 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 BLIDQ8IZY5 108 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 FAM177A1Q8N128 213 aaPredicted RBP13.52□□□□□ -0.25
CNOT4-211ENST00000498534 SLC39A11Q8N1S5 342 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 FBXL6Q8N531 539 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 GJA10Q969M2 543 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
CNOT4-211ENST00000498534 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 APOL5Q9BWW9 433 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 SUCLA2Q9P2R7 463 aaPredicted RBP13.52□□□□□ -0.25
CNOT4-211ENST00000498534 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
CNOT4-211ENST00000498534 WDR81Q562E7 1941 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 A0A087WZ62 844 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 DKC1O60832 514 aaKnown RBP eCLIP13.51□□□□□ -0.25
CNOT4-211ENST00000498534 PHKA2P46019 1235 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 ITIH3Q06033 890 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 SYCE2Q6PIF2 218 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 MOXD1Q6UVY6 613 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 GLB1LQ6UWU2 654 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
CNOT4-211ENST00000498534 ZNF410Q86VK4 478 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 RHPN2Q8IUC4 686 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 EXOC8Q8IYI6 725 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 NECTIN4Q96NY8 510 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 FDXACB1Q9BRP7 624 aaPredicted RBP13.51□□□□□ -0.25
CNOT4-211ENST00000498534 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
CNOT4-211ENST00000498534 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 DDX25Q9UHL0 483 aaKnown RBP13.51□□□□□ -0.25
CNOT4-211ENST00000498534 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
CNOT4-211ENST00000498534 IGKV6-21A0A0C4DH24 114 aa13.5□□□□□ -0.25
CNOT4-211ENST00000498534 NT5C1B-RDH14C9J2C7 533 aa13.5□□□□□ -0.25
CNOT4-211ENST00000498534 EPB41L2O43491 1005 aaKnown RBP13.5□□□□□ -0.25
CNOT4-211ENST00000498534 MAFO75444 373 aaPredicted RBP13.5□□□□□ -0.25
CNOT4-211ENST00000498534 TDP2O95551 362 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms