RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PADI6Q6TGC4 694 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 CATSPER4Q7RTX7 472 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 CRIPAKQ8N1N5 446 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 MCPH1Q8NEM0 835 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 ZNF689Q96CS4 500 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-213ENST00000498495 SAMD11Q96NU1 681 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 ZSCAN16Q9H4T2 348 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-213ENST00000498495 DACT1Q9NYF0 836 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 DNM3Q9UQ16 869 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 MTMR6Q9Y217 621 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 GTPBP6O43824 516 aaPredicted RBP14.22□□□□□ -0.13
HSPG2-213ENST00000498495 PDIA4P13667 645 aaKnown RBP14.22□□□□□ -0.13
HSPG2-213ENST00000498495 PHKA2P46019 1235 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 RESTQ13127 1097 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 ADGRE1Q14246 886 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 FAM102BQ5T8I3 360 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 SPRED2Q7Z698 418 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 MAFAQ8NHW3 353 aaPredicted RBP14.22□□□□□ -0.13
HSPG2-213ENST00000498495 C17orf80Q9BSJ5 609 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 BHMT2Q9H2M3 363 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 ELAC1Q9H777 363 aaKnown RBP14.22□□□□□ -0.13
HSPG2-213ENST00000498495 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
HSPG2-213ENST00000498495 ADGRA3Q8IWK6 1321 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 TTC3P53804 2025 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 EPOPA6NHQ4 379 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 E9PMD0 336 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 CYP11B2P19099 503 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 GLRA2P23416 452 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 PTENP60484 403 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
HSPG2-213ENST00000498495 EPC2Q52LR7 807 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 TWF2Q6IBS0 349 aaKnown RBP14.21□□□□□ -0.13
HSPG2-213ENST00000498495 FAM173BQ6P4H8 233 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 TMEM192Q8IY95 271 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 CMTR2Q8IYT2 770 aaKnown RBP14.21□□□□□ -0.13
HSPG2-213ENST00000498495 FBXO22Q8NEZ5 403 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 ASAP3Q8TDY4 903 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 PPM1EQ8WY54 764 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 CDK5RAP3Q96JB5 506 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 AK8Q96MA6 479 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 MMTAG2Q9BU76 263 aaKnown RBP14.21□□□□□ -0.13
HSPG2-213ENST00000498495 NT5C3AQ9H0P0 336 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 POLR3FQ9H1D9 316 aaPredicted RBP14.21□□□□□ -0.13
HSPG2-213ENST00000498495 GPRC5CQ9NQ84 441 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 PIN4Q9Y237 131 aaKnown RBP14.21□□□□□ -0.13
HSPG2-213ENST00000498495 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
HSPG2-213ENST00000498495 LAMA2P24043 3122 aaKnown RBP14.2□□□□□ -0.14
HSPG2-213ENST00000498495 A0A0U1RQF3 1178 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 INO80B-WBP1J3KQ70 363 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 EYA4O95677 639 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 EOMESO95936 686 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 SKIP12755 728 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 UBA7P41226 1012 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
HSPG2-213ENST00000498495 GRB10Q13322 594 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 PCBP1Q15365 356 aaKnown RBP eCLIP14.2□□□□□ -0.144e-6■■■■□ 20.1
HSPG2-213ENST00000498495 PAN2Q504Q3 1202 aaKnown RBP14.2□□□□□ -0.14
HSPG2-213ENST00000498495 ECHDC2Q86YB7 292 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 KCTD17Q8N5Z5 321 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 RNF169Q8NCN4 708 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 PLIN2Q99541 437 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 MINDY3Q9H8M7 445 aa14.2□□□□□ -0.14
HSPG2-213ENST00000498495 RC3H2Q9HBD1 1191 aaKnown RBP14.2□□□□□ -0.14
HSPG2-213ENST00000498495 TBKBP1A7MCY6 615 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 HOXA2O43364 376 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 ERLIN2O94905 339 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 RB1P06400 928 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 POU3F3P20264 500 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-213ENST00000498495 LONP1P36776 959 aaKnown RBP14.19□□□□□ -0.14
HSPG2-213ENST00000498495 BMPR1AP36894 532 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 GATMP50440 423 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 GPM6BQ13491 265 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 CAPSQ13938 189 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 CCDC85BQ15834 202 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-213ENST00000498495 CABP7Q86V35 215 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
HSPG2-213ENST00000498495 ABI1Q8IZP0 508 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 CALML4Q96GE6 196 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 AGPAT5Q9NUQ2 364 aa14.19□□□□□ -0.14
HSPG2-213ENST00000498495 LRRIQ4A6NIV6 560 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 H3BNC9 293 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 SLC26A4O43511 780 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 LPXNO60711 386 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 FGFR1P11362 822 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 MARCKSP29966 332 aaPredicted RBP14.18□□□□□ -0.14
HSPG2-213ENST00000498495 AXLP30530 894 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 CTNNB1P35222 781 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 PTPAQ15257 358 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 HYIQ5T013 277 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 SPOUT1Q5T280 376 aaKnown RBP14.18□□□□□ -0.14
HSPG2-213ENST00000498495 ZBTB8OSQ8IWT0 167 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 MICALL1Q8N3F8 863 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 GDPD5Q8WTR4 605 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 CLP1Q92989 425 aaKnown RBP14.18□□□□□ -0.14
HSPG2-213ENST00000498495 IFT74Q96LB3 600 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 PNMA5Q96PV4 448 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 TRAIPQ9BWF2 469 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms