RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PRPF31Q8WWY3 499 aaKnown RBP15□□□□□ -0.01
CPNE1-227ENST00000498056 PPP1R12CQ9BZL4 782 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 TBC1D7Q9P0N9 293 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 TMEM63CQ9P1W3 806 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 LARSQ9P2J5 1176 aaKnown RBP15□□□□□ -0.01
CPNE1-227ENST00000498056 CITO14578 2027 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 TRAK2O60296 914 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 RPLP2P05387 115 aaKnown RBP14.99□□□□□ -0.01
CPNE1-227ENST00000498056 PLS3P13797 630 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 NAMPTP43490 491 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 GPC3P51654 580 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 NLRP11P59045 1033 aaKnown RBP14.99□□□□□ -0.01
CPNE1-227ENST00000498056 FAAP100Q0VG06 881 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 BFSP2Q13515 415 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
CPNE1-227ENST00000498056 KMT5BQ4FZB7 885 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 HERC4Q5GLZ8 1057 aaPredicted RBP14.99□□□□□ -0.01
CPNE1-227ENST00000498056 CNNM4Q6P4Q7 775 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 FAM178BQ8IXR5 827 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 RNF149Q8NC42 400 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 CAGE1Q8TC20 777 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 TOX2Q96NM4 488 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 OSMRQ99650 979 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 HTATIP2Q9BUP3 242 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 HIPK3Q9H422 1215 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 KMT5AQ9NQR1 393 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 TRPV2Q9Y5S1 764 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 CDY2AQ9Y6F7 541 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
CPNE1-227ENST00000498056 PHLPP2Q6ZVD8 1323 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 ADGRA3Q8IWK6 1321 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 A0A087WZ62 844 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 FRMD3A2A2Y4 597 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 BIN1O00499 593 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 KLRC4O43908 158 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 SRGAP2CP0DJJ0 459 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 CKBP12277 381 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 PHKA2P46019 1235 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 ZNF131P52739 623 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 TRIM71Q2Q1W2 868 aaKnown RBP14.98□□□□□ -0.01
CPNE1-227ENST00000498056 FAM26FQ5R3K3 315 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 ZBTB8OSQ8IWT0 167 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 FDXACB1Q9BRP7 624 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-227ENST00000498056 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
CPNE1-227ENST00000498056 MRPL44Q9H9J2 332 aaKnown RBP14.98□□□□□ -0.01
CPNE1-227ENST00000498056 C17orf75Q9HAS0 396 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 TMEM39AQ9NV64 488 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 RMND1Q9NWS8 449 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 SEL1LQ9UBV2 794 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 PCDHA5Q9Y5H7 936 aa14.98□□□□□ -0.01
CPNE1-227ENST00000498056 UMODL1Q5DID0 1318 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 PVALEFA0A1B0GWK0 134 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 SLC16A4O15374 487 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 ASAP2O43150 1006 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 CAND2O75155 1236 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 NMT1P30419 496 aaKnown RBP14.97□□□□□ -0.01
CPNE1-227ENST00000498056 NPTX2P47972 431 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 SMTNP53814 917 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 MDM2Q00987 491 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-227ENST00000498056 ZNF618Q5T7W0 954 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 LRRC8DQ7L1W4 858 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 ZNF410Q86VK4 478 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 ELOA2Q8IYF1 753 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-227ENST00000498056 NME8Q8N427 588 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 TBX21Q9UL17 535 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 ANK1P16157 1881 aa14.97□□□□□ -0.01
CPNE1-227ENST00000498056 PTPRSQ13332 1948 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 INO80B-WBP1J3KQ70 363 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 GCNT3O95395 438 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 SELPP16109 830 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 NCKAP1LP55160 1127 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 RBL2Q08999 1139 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 MGAT3Q09327 533 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 PDCD11Q14690 1871 aaKnown RBP14.96□□□□□ -0.01
CPNE1-227ENST00000498056 ISM2Q6H9L7 571 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 RPAINQ86UA6 219 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 GSDMAQ96QA5 445 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 FGFBP2Q9BYJ0 223 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 CELF4Q9BZC1 486 aaKnown RBP14.96□□□□□ -0.01
CPNE1-227ENST00000498056 GCOM2Q9BZD3 368 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-227ENST00000498056 INO80BQ9C086 356 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-227ENST00000498056 C2orf40Q9H1Z8 148 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 OLFML3Q9NRN5 406 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 KIAA1468Q9P260 1216 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 PRKAG2Q9UGJ0 569 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 MAN1B1Q9UKM7 699 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 TRIP11Q15643 1979 aa14.96□□□□□ -0.01
CPNE1-227ENST00000498056 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 H0YCG3 227 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 RBAK-RBAKDNI3L0D1 243 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 EVI5O60447 810 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 GPR32O75388 356 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 CAPN15O75808 1086 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 ERLIN2O94905 339 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 RHOBTB3O94955 611 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 CHRNA1P02708 482 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 MYBP10242 640 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 GHRP10912 638 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms