RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 PRUNE2Q8WUY3 3088 aa17.78■□□□□ 0.44
CTDSP1-214ENST00000497677 ADGRA3Q8IWK6 1321 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 DGAT1O75907 488 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 F13A1P00488 732 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 MUTP22033 750 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 ARL2P36404 184 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 GATMP50440 423 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 CSPP1Q1MSJ5 1256 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 TMEM192Q8IY95 271 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 FIBCD1Q8N539 461 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 ERMNQ8TAM6 284 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 GDPD5Q8WTR4 605 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 TCP11Q8WWU5 503 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 CLP1Q92989 425 aaKnown RBP17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 SAMD11Q96NU1 681 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 MTRQ99707 1265 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 ELAC1Q9H777 363 aaKnown RBP17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 MINDY3Q9H8M7 445 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 LRWD1Q9UFC0 647 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 PCDHB7Q9Y5E2 793 aa17.77■□□□□ 0.44
CTDSP1-214ENST00000497677 COL4A6Q14031 1691 aa17.77■□□□□ 0.43
CTDSP1-214ENST00000497677 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 ASAP2O43150 1006 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 BMPR1AP36894 532 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 BTG3Q14201 252 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 CMTR2Q8IYT2 770 aaKnown RBP17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 ASAP3Q8TDY4 903 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 MMTAG2Q9BU76 263 aaKnown RBP17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 ATP6V0A4Q9HBG4 840 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 CHST12Q9NRB3 414 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 RNF19AQ9NV58 838 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
CTDSP1-214ENST00000497677 A0A0U1RQF3 1178 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 PP2D1A8MPX8 630 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 C5orf67F2Z3F1 127 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 CDC25AP30304 524 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 CCT6AP40227 531 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 CCDC85BQ15834 202 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 HAUS3Q68CZ6 603 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 DTHD1Q6ZMT9 781 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 ZNF598Q86UK7 904 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 SLC17A8Q8NDX2 589 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 FBXO22Q8NEZ5 403 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 TRAIPQ9BWF2 469 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 LMCD1Q9NZU5 365 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 LRFN2Q9ULH4 789 aa17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-214ENST00000497677 H3BNC9 293 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 ATF7P17544 494 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 SFPQP23246 707 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 GLRA2P23416 452 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 HOXA11P31270 313 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 PTENP60484 403 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 ARL6IP4Q66PJ3 421 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 IFNLR1Q8IU57 520 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 GPRC5CQ9NQ84 441 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 PRDM6Q9NQX0 595 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 KIAA1024Q9UPX6 916 aa17.74■□□□□ 0.43
CTDSP1-214ENST00000497677 GTPBP6O43824 516 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 RB1P06400 928 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 FGFR1P11362 822 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 CYP11B2P19099 503 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 IBSPP21815 317 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 CAPSQ13938 189 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 PAN2Q504Q3 1202 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 ATL3Q6DD88 541 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 PADI6Q6TGC4 694 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 CATSPER4Q7RTX7 472 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 POLR3FQ9H1D9 316 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 AGPAT5Q9NUQ2 364 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 STK24Q9Y6E0 443 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 A0A0C4DFX4 3053 aa17.73■□□□□ 0.43
CTDSP1-214ENST00000497677 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 TBKBP1A7MCY6 615 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 EOMESO95936 686 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 RESTQ13127 1097 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 GPM6BQ13491 265 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 MAEAQ7L5Y9 396 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 MCPH1Q8NEM0 835 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 CCDC43Q96MW1 224 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms