RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 TBC1D7Q9P0N9 293 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 RCCD1A6NED2 376 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 FAM13AO94988 1023 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 HERVK_113P62684 666 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 ADAM9Q13443 819 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 TRAPPC11Q7Z392 1133 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 SLC9A9Q8IVB4 645 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 CPXCR1Q8N123 301 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 INPP4AQ96PE3 977 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 TEX13BQ9BXU2 312 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 DAAM1Q9Y4D1 1078 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 MYH11P35749 1972 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 PDE2AO00408 941 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 CHMP2AO43633 222 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 HMGCS2P54868 508 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNF746Q6NUN9 644 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 DPY19L2P1Q6NXN4 242 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNF720Q7Z2F6 126 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 WNK4Q96J92 1243 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 PURBQ96QR8 312 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 RMDN3Q96TC7 470 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 LACRTQ9GZZ8 138 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 ANKEF1Q9NU02 776 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 CPSF2Q9P2I0 782 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 SAR1BQ9Y6B6 198 aa12.61□□□□□ -0.39
SNRNP200-208ENST00000497539 TGFB1I1O43294 461 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 PRPF6O94906 941 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 NR3C1P04150 777 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 NR2F2P24468 414 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 QARSP47897 775 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 CORO7P57737 925 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 TMEM132BQ14DG7 1078 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 C12orf56Q8IXR9 622 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 ATL2Q8NHH9 583 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 CAGE1Q8TC20 777 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 PIGOQ8TEQ8 1089 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 ATP8B3O60423 1300 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 SSU72P8A0A1W2PR75 194 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 MACROD2A1Z1Q3 448 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 ARHGEF35A5YM69 484 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 SPDYE16A6NNV3 312 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 RBAK-RBAKDNI3L0D1 243 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 NEBLO76041 1014 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 NOL4O94818 638 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 KIAA1328Q86T90 577 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 NLRX1Q86UT6 975 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNF483Q8TF39 744 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 ACAD9Q9H845 621 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 RIPK3Q9Y572 518 aa12.6□□□□□ -0.39
SNRNP200-208ENST00000497539 WDR64B1ANS9 1081 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 EPHB6O15197 1021 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 ARHGEF16Q5VV41 709 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 DAW1Q8N136 415 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 DRAXINQ8NBI3 349 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 EHBP1Q8NDI1 1231 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 NSUN6Q8TEA1 469 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 KCNN1Q92952 543 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 CDHR1Q96JP9 859 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 GANQ9H2C0 597 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 POLR2AP24928 1970 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 GCNT3O95395 438 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 ECEL1O95672 775 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 EIF2AK2P19525 551 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 RPS6KA3P51812 740 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 PSMC5P62195 406 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 PDCD2Q16342 344 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 ASTE1Q2TB18 679 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 PADI6Q6TGC4 694 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 IWS1Q96ST2 819 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 PSMB7Q99436 277 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms