RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CCDC113Q9H0I3 377 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 SEMA4AQ9H3S1 761 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 ZBTB3Q9H5J0 574 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 CIDEBQ9UHD4 219 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 STARD13Q9Y3M8 1113 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 USH1CQ9Y6N9 552 aa14□□□□□ -0.17
VEGFA-215ENST00000497139 MAPK13O15264 365 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 GM2AP17900 193 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 KCNA3P22001 575 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 GSTT1P30711 240 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 CACNA2D1P54289 1103 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MYBPC3Q14896 1274 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 SH2D4BQ5SQS7 431 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 FOXB2Q5VYV0 432 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 ARMC3Q5W041 872 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 PPP1R21Q6ZMI0 780 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 ANKRD23Q86SG2 305 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 GPIHBP1Q8IV16 184 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 STKLD1Q8NE28 680 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 GATA6Q92908 595 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 DDX23Q9BUQ8 820 aaKnown RBP13.99□□□□□ -0.17
VEGFA-215ENST00000497139 PCYOX1Q9UHG3 505 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.99□□□□□ -0.171e-11■□□□□ 9.4
VEGFA-215ENST00000497139 NCANO14594 1321 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 FGFR2P21802 821 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 ACBD5Q5T8D3 534 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-215ENST00000497139 ZNF571Q7Z3V5 609 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-215ENST00000497139 SPZ1Q9BXG8 430 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MIS12Q9H081 205 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 METTL14Q9HCE5 456 aaKnown RBP13.99□□□□□ -0.17
VEGFA-215ENST00000497139 IL1RAPL1Q9NZN1 696 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 LNPEPQ9UIQ6 1025 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 ACTL7BQ9Y614 415 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 COMMD3-BMI1R4GMX3 469 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MEGF6O75095 1541 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MYH3P11055 1940 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 PHF2O75151 1096 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 TCEA3O75764 348 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 RASA1P20936 1047 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 CABP4P57796 275 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 HLFQ16534 295 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 ZNF568Q3ZCX4 644 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 CGB2Q6NT52 195 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 CYFIP1Q7L576 1253 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 LONP2Q86WA8 852 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MYOCDQ8IZQ8 938 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 HAPLN3Q96S86 360 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 TBC1D10AQ9BXI6 508 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MYLK2Q9H1R3 596 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 DNAAF2Q9NVR5 837 aaKnown RBP13.99□□□□□ -0.17
VEGFA-215ENST00000497139 NLRP2Q9NX02 1062 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 BLOC1S6Q9UL45 172 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 PCDHA6Q9UN73 950 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 PCDHA8Q9Y5H6 950 aa13.99□□□□□ -0.17
VEGFA-215ENST00000497139 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 MAGEB2O15479 319 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 GGPS1O95749 300 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 SLC5A1P13866 664 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 ATF3P18847 181 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 STX2P32856 288 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 RCN2Q14257 317 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 BICDL1Q6ZP65 573 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 SLC17A8Q8NDX2 589 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 LRRC37BQ96QE4 947 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 DDX3YO15523 660 aaKnown RBP13.98□□□□□ -0.17
VEGFA-215ENST00000497139 MARK3P27448 753 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 PTGIRP43119 386 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 ARID5AQ03989 594 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 NELFCDQ8IXH7 590 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 GOLPH3Q9H4A6 298 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 DBR1Q9UK59 544 aaKnown RBP13.98□□□□□ -0.17
VEGFA-215ENST00000497139 SNX24Q9Y343 169 aa13.98□□□□□ -0.17
VEGFA-215ENST00000497139 MINDY4BA8MYZ0 360 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ATP9AO75110 1047 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 TTLL1O95922 423 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 PTPN4P29074 926 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 EPS15P42566 896 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 NT5C2P49902 561 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 RASGRF1Q13972 1273 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 LRRC14Q15048 493 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 CCDC6Q16204 474 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 C1QTNF12Q5T7M4 302 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ZC3H3Q8IXZ2 948 aaKnown RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 PPFIBP2Q8ND30 876 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 SMC1BQ8NDV3 1235 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 PPP1R14BQ96C90 147 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 SLC7A6OSQ96CW6 309 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 BRIP1Q9BX63 1249 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 SAR1AQ9NR31 198 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 NKIRAS1Q9NYS0 192 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ADGRA3Q8IWK6 1321 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 SYNGAP1Q96PV0 1343 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 MYMKA6NI61 221 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ZNF365Q70YC5 407 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ZNF513Q8N8E2 541 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 LARP4BQ92615 738 aaKnown RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ART4Q93070 314 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms