RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PA2G4Q9UQ80 394 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 LRRC10BA6NIK2 292 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RASSF10A6NK89 507 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZBED4O75132 1171 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ATP6V1G1O75348 118 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RHOBTB3O94955 611 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 INMTO95050 263 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RTN3O95197 1032 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SSBP05455 408 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 KRT10P13645 584 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TACR1P25103 407 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ELF1P32519 619 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SKIV2L2P42285 1042 aaKnown RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HALP42357 657 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RANBP1P43487 201 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CCT8P50990 548 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 PSMD7P51665 324 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HNRNPUQ00839 825 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 AUHQ13825 339 aaKnown RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SHROOM1Q2M3G4 852 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 EMC10Q5UCC4 262 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RTL10Q7L3V2 364 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HOOK3Q86VS8 718 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 LURAP1LQ8IV03 231 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CEP57L1Q8IYX8 460 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF654Q8IZM8 581 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TTC39CQ8N584 583 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SMYD1Q8NB12 490 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SPC24Q8NBT2 197 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CPLX3Q8WVH0 158 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CTNNBL1Q8WYA6 563 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RABGGTAQ92696 567 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ATP6V1E2Q96A05 226 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HVCN1Q96D96 273 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 C8orf76Q96K31 380 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HAUS7Q99871 368 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CDADC1Q9BWV3 514 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SGPP1Q9BX95 441 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 AP1M1Q9BXS5 423 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM8Q9BZR9 551 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 DBNDD1Q9H9R9 158 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 A1CFQ9NQ94 594 aaKnown RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 AASDHPPTQ9NRN7 309 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HDAC6Q9UBN7 1215 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CROTQ9UKG9 612 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF451Q9Y4E5 1061 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TTLL3Q9Y4R7 772 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 MRFAP1Q9Y605 127 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 A0A1W2PQH9 124 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM64A6NGJ6 449 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM64BA6NI03 449 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 GOLGA6L10A6NI86 522 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TSPY2A6NKD2 308 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 NOTOA8MTQ0 251 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 AKR1B15C9JRZ8 316 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 DIAPH2O60879 1101 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF254O75437 659 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CPP00450 1065 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZGLP1P0C6A0 271 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TSPY3P0CV98 308 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TSPY8P0CW00 308 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SRFP11831 508 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZFXP17010 805 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 U2AF2P26368 475 aaKnown RBP eCLIP3.44□□□□□ -1.863e-6■■■□□ 19.1
SNRNP48-202ENST00000496946 RPL13P26373 211 aaKnown RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TCF7P36402 384 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 GRIA2P42262 883 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 MAGEA10P43363 369 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CENPAP49450 140 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SARSP49591 514 aaKnown RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 PEX5P50542 639 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF445P59923 1031 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TSPY1Q01534 308 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 MCL1Q07820 350 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 GPS2Q13227 327 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 PDE1CQ14123 709 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 NEDD9Q14511 834 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 C21orf62-AS1Q17RA5 79 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 PRSS53Q2L4Q9 553 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 GAB4Q2WGN9 574 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 BBS9Q3SYG4 887 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TNNI3KQ59H18 835 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 SLC10A5Q5PT55 438 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 OGFOD2Q6N063 350 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CCDC129Q6ZRS4 1044 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 KIAA0907Q7Z7F0 614 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 KIAA1328Q86T90 577 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ENAHQ8N8S7 591 aaPredicted RBP3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 B4GALNT2Q8NHY0 566 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ANKRD7Q92527 254 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF700Q9H0M5 742 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 HOMER3Q9NSC5 361 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 TCP11L1Q9NUJ3 509 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 RGL1Q9NZL6 768 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CTNNA3Q9UI47 895 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 FAM184BQ9ULE4 1060 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 CARD8Q9Y2G2 431 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 PLEKHG2Q9H7P9 1386 aa3.44□□□□□ -1.86
SNRNP48-202ENST00000496946 H0YC42 278 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms