RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
VTI1A-209ENST00000496445 SLFN12Q8IYM2 578 aa15.99■□□□□ 0.15
VTI1A-209ENST00000496445 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
VTI1A-209ENST00000496445 IGFLR1Q9H665 355 aa15.99■□□□□ 0.15
VTI1A-209ENST00000496445 DHX33Q9H6R0 707 aaKnown RBP15.99■□□□□ 0.15
VTI1A-209ENST00000496445 BMP2KQ9NSY1 1161 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-209ENST00000496445 PCDHB12Q9Y5F1 795 aa15.99■□□□□ 0.15
VTI1A-209ENST00000496445 A0A0U1RQF3 1178 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 ZBTB39O15060 712 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 HOXA2O43364 376 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 NCK2O43639 380 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 DKC1O60832 514 aaKnown RBP eCLIP15.98■□□□□ 0.15
VTI1A-209ENST00000496445 FGF18O76093 207 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 LAG3P18627 525 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 SFPQP23246 707 aaKnown RBP eCLIP15.98■□□□□ 0.15
VTI1A-209ENST00000496445 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
VTI1A-209ENST00000496445 DNM2P50570 870 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 CDC42EP1Q00587 391 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 CTTNQ14247 550 aaKnown RBP15.98■□□□□ 0.15
VTI1A-209ENST00000496445 CLUL1Q15846 466 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 PUS10Q3MIT2 529 aaKnown RBP15.98■□□□□ 0.15
VTI1A-209ENST00000496445 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 LRRC43Q8N309 656 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 RNF169Q8NCN4 708 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 HELQQ8TDG4 1101 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 NLRP4Q96MN2 994 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 KIF2CQ99661 725 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
VTI1A-209ENST00000496445 EPHX3Q9H6B9 360 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 IFT122Q9HBG6 1241 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 AAASQ9NRG9 546 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 COL4A3BPQ9Y5P4 624 aa15.98■□□□□ 0.15
VTI1A-209ENST00000496445 FSCN2O14926 492 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 MARCH6O60337 910 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 GLP2RO95838 553 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 PBX3P40426 434 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 POLGP54098 1239 aaPredicted RBP15.97■□□□□ 0.15
VTI1A-209ENST00000496445 UBE3AQ05086 875 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 ADAM15Q13444 863 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 EMC2Q15006 297 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 CALCRLQ16602 461 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 CCDC83Q8IWF9 413 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 THNSL1Q8IYQ7 743 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 SLC7A3Q8WY07 619 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 TMEM143Q96AN5 459 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 TLR9Q9NR96 1032 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 CHST12Q9NRB3 414 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 DACT1Q9NYF0 836 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 PIN4Q9Y237 131 aaKnown RBP15.97■□□□□ 0.15
VTI1A-209ENST00000496445 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
VTI1A-209ENST00000496445 NEMFO60524 1076 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 SLITRK3O94933 977 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
VTI1A-209ENST00000496445 RFC5P40937 340 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 PHKA2P46019 1235 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 NRIP1P48552 1158 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 ERVFC1P60507 584 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 GUCY1B3Q02153 619 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 TRIM29Q14134 588 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 CSPP1Q1MSJ5 1256 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 GJD3Q8N144 294 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 EFHBQ8N7U6 833 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 MSLNLQ96KJ4 702 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 MTMR9Q96QG7 549 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 EIF2AK1Q9BQI3 630 aaKnown RBP15.96■□□□□ 0.15
VTI1A-209ENST00000496445 TRAIPQ9BWF2 469 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 ZSWIM4Q9H7M6 989 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 MINDY3Q9H8M7 445 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 XPNPEP1Q9NQW7 623 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 CLEC1BQ9P126 229 aa15.96■□□□□ 0.15
VTI1A-209ENST00000496445 MEIS3P2A8K0S8 358 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 MBTPS2O43462 519 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 EOMESO95936 686 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 PLCB3Q01970 1234 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 ZP2Q05996 745 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 LAMTOR4Q0VGL1 99 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 SMAD4Q13485 552 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 SMAD2Q15796 467 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 TWF2Q6IBS0 349 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 KCNT2Q6UVM3 1135 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 CATSPER4Q7RTX7 472 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 RBM23Q86U06 439 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 ABI1Q8IZP0 508 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 VN1R2Q8NFZ6 395 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 PRPF31Q8WWY3 499 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 PSPC1Q8WXF1 523 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 LPPQ93052 612 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 PPP2R3CQ969Q6 453 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 HSD17B14Q9BPX1 270 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 TMEM60Q9H2L4 133 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 TTC12Q9H892 705 aaPredicted RBP15.95■□□□□ 0.14
VTI1A-209ENST00000496445 C11orf16Q9NQ32 467 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 AGPAT5Q9NUQ2 364 aa15.95■□□□□ 0.14
VTI1A-209ENST00000496445 POTEMA6NI47 508 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 LYPLA2O95372 231 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 NDUFV1P49821 464 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms