RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 MRPL17Q9NRX2 175 aaKnown RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 PNMA6FA0A0J9YX94 578 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 HBP1O60381 514 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
ATG3-209ENST00000496423 ATP9AO75110 1047 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 RPS9P46781 194 aaKnown RBP13.36□□□□□ -0.27
ATG3-209ENST00000496423 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
ATG3-209ENST00000496423 MTMR1Q13613 665 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 UNQ6494/PRO21346Q6UXR6 183 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 KIAA0319LQ8IZA0 1049 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 MYADMQ96S97 322 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 OSMRQ99650 979 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
ATG3-209ENST00000496423 JPH1Q9HDC5 661 aaPredicted RBP13.36□□□□□ -0.27
ATG3-209ENST00000496423 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 DACT1Q9NYF0 836 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
ATG3-209ENST00000496423 COL1A2P08123 1366 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 FASNP49327 2511 aaKnown RBP13.35□□□□□ -0.27
ATG3-209ENST00000496423 ANHXE9PGG2 379 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 INPPL1O15357 1258 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 ADH1AP07327 375 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 GPC5P78333 572 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
ATG3-209ENST00000496423 KIZQ2M2Z5 673 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
ATG3-209ENST00000496423 MTSS1LQ765P7 747 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 KDF1Q8NAX2 398 aaPredicted RBP13.35□□□□□ -0.27
ATG3-209ENST00000496423 HDAC7Q8WUI4 952 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
ATG3-209ENST00000496423 PIGSQ96S52 555 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 LTB4R2Q9NPC1 389 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 RNF19AQ9NV58 838 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 NUMBLQ9Y6R0 609 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 GPR179Q6PRD1 2367 aa13.35□□□□□ -0.27
ATG3-209ENST00000496423 EVPLQ92817 2033 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 A0A0U1RQF3 1178 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 CNPP09543 421 aaKnown RBP13.34□□□□□ -0.27
ATG3-209ENST00000496423 SKIP12755 728 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 LIMK1P53667 647 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 HTR4Q13639 388 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 LPAL2Q16609 132 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 AASDHQ4L235 1098 aaPredicted RBP13.34□□□□□ -0.27
ATG3-209ENST00000496423 CLLU1OSQ5K130 101 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 FAM160B1Q5W0V3 765 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.34□□□□□ -0.27
ATG3-209ENST00000496423 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
ATG3-209ENST00000496423 CLDN23Q96B33 292 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 PKD2L1Q9P0L9 805 aa13.34□□□□□ -0.27
ATG3-209ENST00000496423 GLUD1P00367 558 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 CNR2P34972 360 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 SIM2Q14190 667 aaPredicted RBP13.33□□□□□ -0.28
ATG3-209ENST00000496423 TSSK4Q6SA08 328 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 ZNF852Q6ZMS4 543 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 GET4Q7L5D6 327 aaPredicted RBP13.33□□□□□ -0.28
ATG3-209ENST00000496423 TICAM2Q86XR7 235 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
ATG3-209ENST00000496423 EVI5LQ96CN4 794 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 PCYT2Q99447 389 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 KRT23Q9C075 422 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 PLEKHA4Q9H4M7 779 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 PRMT8Q9NR22 394 aaPredicted RBP13.33□□□□□ -0.28
ATG3-209ENST00000496423 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 LHX6Q9UPM6 363 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 LAMA4Q16363 1823 aa13.33□□□□□ -0.28
ATG3-209ENST00000496423 PALM3A6NDB9 673 aaPredicted RBP13.32□□□□□ -0.28
ATG3-209ENST00000496423 C1QTNF9BB2RNN3 333 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 ALDH2P05091 517 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATG3-209ENST00000496423 URODP06132 367 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 GALTP07902 379 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 C1QTNF9P0C862 333 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 TMOD1P28289 359 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 WTAPQ15007 396 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 GLB1LQ6UWU2 654 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 TBC1D10CQ8IV04 446 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 METTL13Q8N6R0 699 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 PI4K2BQ8TCG2 481 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 PPP1R16BQ96T49 567 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 ZSWIM5Q9P217 1185 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
ATG3-209ENST00000496423 NEDD4P46934 1319 aa13.32□□□□□ -0.28
ATG3-209ENST00000496423 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
ATG3-209ENST00000496423 BACH1O14867 736 aa13.31□□□□□ -0.28
ATG3-209ENST00000496423 GDF9O60383 454 aa13.31□□□□□ -0.28
ATG3-209ENST00000496423 C1RP00736 705 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms