RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 IFT74Q96LB3 600 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 HSD3B7Q9H2F3 369 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 C17orf75Q9HAS0 396 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 RWDD2AQ9UIY3 292 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 BECN2A8MW95 431 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 TREHO43280 583 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 PPP1R37O75864 691 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 NCKAP1LP55160 1127 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 MYL5Q02045 173 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 LAMTOR4Q0VGL1 99 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 CAPSQ13938 189 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 CENPPQ6IPU0 288 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 NFRKBQ6P4R8 1299 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 RETREG2Q8NC44 543 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 TMEM161BQ8NDZ6 487 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 ENOX1Q8TC92 643 aaKnown RBP17.29■□□□□ 0.36
PHF1-211ENST00000495509 SPIRE2Q8WWL2 714 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 TCP11Q8WWU5 503 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 P2RX5Q93086 422 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 EEF2KMTQ96G04 330 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 KMT5AQ9NQR1 393 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
PHF1-211ENST00000495509 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 IKBKBO14920 756 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 SRGAP2CP0DJJ0 459 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 CCNE1P24864 410 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 SMTNP53814 917 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 KNOP1Q1ED39 458 aaKnown RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 HSP90AA4PQ58FG1 418 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 TTI2Q6NXR4 508 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 RUFY4Q6ZNE9 571 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 RHPN2Q8IUC4 686 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 KIAA0319LQ8IZA0 1049 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 PSPC1Q8WXF1 523 aaKnown RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 VTI1AQ96AJ9 217 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 DUSP9Q99956 384 aaKnown RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 JPH2Q9BR39 696 aaPredicted RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 SAMSN1Q9NSI8 373 aaKnown RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 PCDHB13Q9Y5F0 798 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 C17orf102A2RUQ5 167 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 MBLAC1A4D2B0 266 aaPredicted RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 GAS2O43903 313 aaKnown RBP17.28■□□□□ 0.36
PHF1-211ENST00000495509 VTNP04004 478 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 HOXC8P31273 242 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 DNM2P50570 870 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 GTF2BQ00403 316 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 PPP1R16BQ96T49 567 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
PHF1-211ENST00000495509 DENND3A2RUS2 1198 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 SMTNL1A8MU46 457 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.35
PHF1-211ENST00000495509 PPP1R2P41236 205 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 NAMPTP43490 491 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 BMT2Q1RMZ1 405 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 SPATA1Q5VX52 437 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.35
PHF1-211ENST00000495509 TAS1R3Q7RTX0 852 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 ZNF333Q96JL9 665 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 FAM49AQ9H0Q0 323 aaPredicted RBP17.27■□□□□ 0.35
PHF1-211ENST00000495509 ST6GALNAC4Q9H4F1 302 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 AKT3Q9Y243 479 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 USP20Q9Y2K6 914 aa17.27■□□□□ 0.35
PHF1-211ENST00000495509 GOLGA6L19H0YKK7 550 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 TGFB1I1O43294 461 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 CYP2C9P11712 490 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 MXD4Q14582 209 aaPredicted RBP17.26■□□□□ 0.35
PHF1-211ENST00000495509 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 RNF149Q8NC42 400 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 TSEN34Q9BSV6 310 aaKnown RBP17.26■□□□□ 0.35
PHF1-211ENST00000495509 ARHGAP28Q9P2N2 729 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 GTF2IRD1Q9UHL9 959 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 ZMYM2Q9UBW7 1377 aa17.26■□□□□ 0.35
PHF1-211ENST00000495509 KIAA0100Q14667 2235 aaKnown RBP17.25■□□□□ 0.35
PHF1-211ENST00000495509 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 AP5Z1O43299 807 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 TMOD1P28289 359 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 TMEM62Q0P6H9 643 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 PPP2R5AQ15172 486 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
PHF1-211ENST00000495509 ZCWPW2Q504Y3 356 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 DEPTORQ8TB45 409 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 TBX20Q9UMR3 447 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 A0A1W2PQ45 241 aaPredicted RBP17.25■□□□□ 0.35
PHF1-211ENST00000495509 A0A1W2PQY0 241 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 TISP43B9A030 160 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
PHF1-211ENST00000495509 KIF20AO95235 890 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 ATP1A3P13637 1013 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 TPD52L1Q16890 204 aaPredicted RBP17.25■□□□□ 0.35
PHF1-211ENST00000495509 STXBP4Q6ZWJ1 553 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 DNAJB3Q8WWF6 145 aa17.25■□□□□ 0.35
PHF1-211ENST00000495509 ACCSQ96QU6 501 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms