RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PI4K2BG5E9Z4 385 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 FSCN2O14926 492 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 PER2O15055 1255 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 ZBTB39O15060 712 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-208ENST00000494728 PSMC5P62195 406 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 SMAD2Q15796 467 aaKnown RBP13.07□□□□□ -0.32
VTI1A-208ENST00000494728 ODR4Q5SWX8 454 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 SPOUT1Q5T280 376 aaKnown RBP13.07□□□□□ -0.32
VTI1A-208ENST00000494728 EFHBQ8N7U6 833 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 HELQQ8TDG4 1101 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 LXNQ9BS40 222 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 CYP26B1Q9NR63 512 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 TLR9Q9NR96 1032 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 RGL1Q9NZL6 768 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 DENND4AQ7Z401 1863 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 USP34Q70CQ2 3546 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 B4GALT3O60512 393 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
VTI1A-208ENST00000494728 QARSP47897 775 aaKnown RBP13.06□□□□□ -0.32
VTI1A-208ENST00000494728 NDUFV1P49821 464 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 CYP4A11Q02928 519 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 SMAD4Q13485 552 aaKnown RBP13.06□□□□□ -0.32
VTI1A-208ENST00000494728 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
VTI1A-208ENST00000494728 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 TMEM173Q86WV6 379 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-208ENST00000494728 RHPN2Q8IUC4 686 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 THNSL1Q8IYQ7 743 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 LPPQ93052 612 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 FAM20AQ96MK3 541 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 NLRP4Q96MN2 994 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 MINDY3Q9H8M7 445 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 IFT122Q9HBG6 1241 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 SUCLA2Q9P2R7 463 aaPredicted RBP13.06□□□□□ -0.32
VTI1A-208ENST00000494728 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 C2orf16Q68DN1 1984 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 WDR87Q6ZQQ6 2873 aa13.06□□□□□ -0.32
VTI1A-208ENST00000494728 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 NCK2O43639 380 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-208ENST00000494728 LAG3P18627 525 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 KRT2P35908 639 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 PHKA2P46019 1235 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 CTTNQ14247 550 aaKnown RBP13.05□□□□□ -0.32
VTI1A-208ENST00000494728 PLPP4Q5VZY2 271 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 NCAPH2Q6IBW4 605 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 ADHFE1Q8IWW8 467 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 BCL7CQ8WUZ0 217 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-208ENST00000494728 TMEM143Q96AN5 459 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 DHX33Q9H6R0 707 aaKnown RBP13.05□□□□□ -0.32
VTI1A-208ENST00000494728 CDH22Q9UJ99 828 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 PIN4Q9Y237 131 aaKnown RBP13.05□□□□□ -0.32
VTI1A-208ENST00000494728 VPS13AQ96RL7 3174 aa13.05□□□□□ -0.32
VTI1A-208ENST00000494728 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 TBX3O15119 743 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 GPR37L1O60883 481 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 EYA4O95677 639 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
VTI1A-208ENST00000494728 NEK4P51957 841 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 UBE3AQ05086 875 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 KCNC3Q14003 757 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 EMC2Q15006 297 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 ANKRD1Q15327 319 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-208ENST00000494728 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
VTI1A-208ENST00000494728 TCF25Q9BQ70 676 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 GCOM2Q9BZD3 368 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-208ENST00000494728 TLE6Q9H808 572 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 XPNPEP1Q9NQW7 623 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 PRKAG3Q9UGI9 489 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 USP15Q9Y4E8 981 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-208ENST00000494728 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
VTI1A-208ENST00000494728 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 HOXA2O43364 376 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 XBP1P17861 261 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
VTI1A-208ENST00000494728 YWHABP31946 246 aaKnown RBP13.03□□□□□ -0.32
VTI1A-208ENST00000494728 AFF1P51825 1210 aaKnown RBP13.03□□□□□ -0.32
VTI1A-208ENST00000494728 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-208ENST00000494728 COASYQ13057 564 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 EPHA7Q15375 998 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 DUSP6Q16828 381 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
VTI1A-208ENST00000494728 C4orf19Q8IY42 314 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 DIS3L2Q8IYB7 885 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms