RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 ECHDC2Q86YB7 292 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 FGF14Q92915 247 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 LOXL4Q96JB6 756 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 RTEL1Q9NZ71 1219 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 NEUROG3Q9Y4Z2 214 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 KAT6AQ92794 2004 aa12.61□□□□□ -0.39
TRIM59-206ENST00000494486 GIPC1O14908 333 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 LILRB3O75022 631 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 ZSCAN20P17040 1043 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-206ENST00000494486 CRYBB1P53674 252 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-206ENST00000494486 C19orf57Q0VDD7 668 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 CEP68Q76N32 757 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 FAM228AQ86W67 206 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 TMEM173Q86WV6 379 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-206ENST00000494486 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-206ENST00000494486 HDAC7Q8WUI4 952 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 ZNF707Q96C28 371 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-206ENST00000494486 ARRDC1-AS1Q9H2J1 176 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 MRPL17Q9NRX2 175 aaKnown RBP12.6□□□□□ -0.39
TRIM59-206ENST00000494486 MYH7P12883 1935 aa12.6□□□□□ -0.39
TRIM59-206ENST00000494486 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
TRIM59-206ENST00000494486 AXIN1O15169 862 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 ZC3H11AO75152 810 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM59-206ENST00000494486 RFPL2O75678 378 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 CXCL12P48061 93 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 CCDC6Q16204 474 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 RRP12Q5JTH9 1297 aaKnown RBP12.59□□□□□ -0.39
TRIM59-206ENST00000494486 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 MTHFD1LQ6UB35 978 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 PROSER1Q86XN7 944 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 RNF169Q8NCN4 708 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 HELQQ8TDG4 1101 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 BBC3Q96PG8 261 aaPredicted RBP12.59□□□□□ -0.39
TRIM59-206ENST00000494486 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 CDH7Q9ULB5 785 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
TRIM59-206ENST00000494486 UNC79Q9P2D8 2635 aa12.58□□□□□ -0.39
TRIM59-206ENST00000494486 CHURC1-FNTBB4DL54 471 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 GLUD1P00367 558 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 ADH1AP07327 375 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 GALTP07902 379 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 CEACAM1P13688 526 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 FNTBP49356 437 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 TRAF1Q13077 416 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
TRIM59-206ENST00000494486 COL28A1Q2UY09 1125 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 KIAA0319LQ8IZA0 1049 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
TRIM59-206ENST00000494486 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 ZDHHC7Q9NXF8 308 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 FRMPD4Q14CM0 1322 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
TRIM59-206ENST00000494486 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
TRIM59-206ENST00000494486 A0A0U1RQF3 1178 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 MAN2B1O00754 1011 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 C1RP00736 705 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 FSHRP23945 695 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 KLRC1P26715 233 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 SH3PXD2AQ5TCZ1 1133 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 DAB2IPQ5VWQ8 1189 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 ZNF598Q86UK7 904 aaKnown RBP12.57□□□□□ -0.4
TRIM59-206ENST00000494486 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 ZNF687Q8N1G0 1237 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-206ENST00000494486 CDHR1Q96JP9 859 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 VN1R3Q9BXE9 311 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 ADAMTS10Q9H324 1103 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 ECHDC1Q9NTX5 307 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 NAV2Q8IVL1 2488 aa12.57□□□□□ -0.4
TRIM59-206ENST00000494486 HMMRO75330 724 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 EPN2O95208 641 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM59-206ENST00000494486 CSRP1P21291 193 aaKnown RBP12.56□□□□□ -0.4
TRIM59-206ENST00000494486 TROAPQ12815 778 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 PLA2G2CQ5R387 149 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
TRIM59-206ENST00000494486 PCYT2Q99447 389 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 OSMRQ99650 979 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 PHF20Q9BVI0 1012 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 NRDE2Q9H7Z3 1164 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 PCDHGA5Q9Y5G8 931 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 COL4A3Q01955 1670 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
TRIM59-206ENST00000494486 LAMA4Q16363 1823 aa12.55□□□□□ -0.4
TRIM59-206ENST00000494486 FOXP2O15409 715 aa12.55□□□□□ -0.4
TRIM59-206ENST00000494486 ATP9AO75110 1047 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms