RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRA2B-216ENST00000493864 SEC16BQ96JE7 1060 aa7.59□□□□□ -1.19
TRA2B-216ENST00000493864 CLMNQ96JQ2 1002 aa7.59□□□□□ -1.19
TRA2B-216ENST00000493864 SEMA6BQ9H3T3 888 aa7.59□□□□□ -1.19
TRA2B-216ENST00000493864 TMX2Q9Y320 296 aa7.59□□□□□ -1.19
TRA2B-216ENST00000493864 ZHX2Q9Y6X8 837 aa7.59□□□□□ -1.19
TRA2B-216ENST00000493864 OTOFQ9HC10 1997 aa7.59□□□□□ -1.2
TRA2B-216ENST00000493864 GREB1LQ9C091 1923 aaPredicted RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 JAK2O60674 1132 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 DDAH1O94760 285 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 CELF2O95319 508 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 PLEKHA8P1O95397 391 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 CST3P01034 146 aaPredicted RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 HSP90AA1P07900 732 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 GOLGA8HP0CJ92 632 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 CALM1P0DP23 149 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 CALM2P0DP24 149 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 CALM3P0DP25 149 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 YARSP54577 528 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 SPP2Q13103 211 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 VGLL4Q14135 290 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 GRM4Q14833 912 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 NTRK3Q16288 839 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 SLC35G1Q2M3R5 365 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 NOL9Q5SY16 702 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 SLFN13Q68D06 897 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 ARMC9Q7Z3E5 817 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 ZAR1Q86SH2 424 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 SRBD1Q8N5C6 995 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 TOP6BLQ8N6T0 577 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 SLC43A3Q8NBI5 491 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 GIMAP7Q8NHV1 300 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 CPLX3Q8WVH0 158 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 INTS4Q96HW7 963 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 PSMG3-AS1Q96PY0 264 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 MAP3K14Q99558 947 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 MAD2L2Q9UI95 211 aa7.58□□□□□ -1.2
TRA2B-216ENST00000493864 ABT1Q9ULW3 272 aaKnown RBP7.58□□□□□ -1.2
TRA2B-216ENST00000493864 FRMPD2Q68DX3 1309 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 CASP8AP2Q9UKL3 1982 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 THSD7BQ9C0I4 1608 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 MYH4Q9Y623 1939 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 hCG_1642624A0A1W2PR95 340 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 WDR64B1ANS9 1081 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 KLRF2D3W0D1 207 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 CPLX1O14810 134 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 GSC2O15499 205 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 DHX16O60231 1041 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 LEFTY1O75610 366 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 NDUFB10O96000 172 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 PARP1P09874 1014 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 SNHG28P0DPA3 235 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 PDHBP11177 359 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 IMPDH2P12268 514 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 FDPSP14324 419 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 IFNAR1P17181 557 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 KIF5BP33176 963 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 RCAN1P53805 252 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 GRM1Q13255 1194 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 ZYXQ15942 572 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 ARSHQ5FYA8 562 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 OVOS1Q6IE37 1185 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 TMTC3Q6ZXV5 915 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 KCTD1Q719H9 257 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 NBPF11Q86T75 865 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 ANKRD13AQ8IZ07 590 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 SPICE1Q8N0Z3 855 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 C2orf69Q8N8R5 385 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 MFSD2AQ8NA29 543 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 NSUN7Q8NE18 718 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 GMCL1P1Q8NEA9 526 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 CTCFLQ8NI51 663 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 SMARCC2Q8TAQ2 1214 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 GATA6Q92908 595 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 PHKBQ93100 1093 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 DDX11Q96FC9 970 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 NUP88Q99567 741 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 MIPEPQ99797 713 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 LLPHQ9BRT6 129 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 DUSP23Q9BVJ7 150 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 SRRTQ9BXP5 876 aaKnown RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 UBA5Q9GZZ9 404 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 CPVLQ9H3G5 476 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 GBA2Q9HCG7 927 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 PRDM10Q9NQV6 1147 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 GMIPQ9P107 970 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
TRA2B-216ENST00000493864 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-216ENST00000493864 CCDC196A0A1B0GTZ2 297 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 PTPDC1A2A3K4 754 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 TRIM75PA6NK02 468 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 FAM170BA6NMN3 283 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 F13BP05160 661 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 GJB2P29033 226 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 GNAQP50148 359 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms