RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 KRT75O95678 551 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 SNRPA1P09661 255 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CMA1P23946 247 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CFAP221Q4G0U5 840 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 WDR45BQ5MNZ6 344 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 PPP2R2DQ66LE6 453 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TTC39CQ8N584 583 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 ANKK1Q8NFD2 765 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 GIPC3Q8TF64 312 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 RUBCNQ92622 972 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 GFM2Q969S9 779 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 IFT43Q96FT9 208 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 NSMCE3Q96MG7 304 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TMEM237Q96Q45 408 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 DNAI2Q9GZS0 605 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 DCLRE1BQ9H816 532 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 ARHGEF3Q9NR81 526 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 SNX12Q9UMY4 172 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 FAM32AQ9Y421 112 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 GRM8O00222 908 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 COBLO75128 1261 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 WFS1O76024 890 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 BAG2O95816 211 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CDC27P30260 824 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CSE1LP55060 971 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TOB2Q14106 344 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 NR1D2Q14995 579 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 SLC9C2Q5TAH2 1124 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 ENOX1Q8TC92 643 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 PIGBQ92521 554 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 EAF2Q96CJ1 260 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 HNRNPABQ99729 332 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 HEPHQ9BQS7 1158 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TAB2Q9NYJ8 693 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TLR7Q9NYK1 1049 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 HSFX1Q9UBD0 423 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 SPATA31A1Q5TZJ5 1347 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 AP3B1O00203 1094 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TRPA1O75762 1119 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TSPAN9O75954 239 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CSF1RP07333 972 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 RGS2P41220 211 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 BTKQ06187 659 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 ZNF844Q08AG5 666 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 MSLNQ13421 630 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 LRRC14Q15048 493 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 PARP10Q53GL7 1025 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 HSP90AA5PQ58FG0 334 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 ERMARDQ5T6L9 678 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 TBC1D9BQ66K14 1250 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 GPIHBP1Q8IV16 184 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 SUN5Q8TC36 379 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 XAGE3Q8WTP9 111 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 HAPLN3Q96S86 360 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 PRPF18Q99633 342 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CCSER1Q9C0I3 900 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 MRPL46Q9H2W6 279 aaKnown RBP7.36□□□□□ -1.23
VPS13B-205ENST00000493587 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 USP20Q9Y2K6 914 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 RABGAP1Q9Y3P9 1069 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 IRS2Q9Y4H2 1338 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 A0A0G2JS52 829 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 A0A1B0GTH6 734 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GOLGA8TH3BQL2 631 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RGS16O15492 202 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 NCK2O43639 380 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GOLGA8HP0CJ92 632 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PRKACBP22694 351 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 TARSP26639 723 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MZF1P28698 734 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CCT8P50990 548 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 POLR2FP61218 127 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 UBXN1Q04323 297 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PPIDQ08752 370 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MTMR3Q13615 1198 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ANO1Q5XXA6 986 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 KLHL35Q6PF15 583 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 IFNLR1Q8IU57 520 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RAVER1Q8IY67 606 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ANKRD42Q8N9B4 389 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 FSD1Q9BTV5 496 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MLXIPLQ9NP71 852 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 KCNMB3Q9NPA1 279 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 STRN4Q9NRL3 753 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 FBXL5Q9UKA1 691 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PPME1Q9Y570 386 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 DUSP10Q9Y6W6 482 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 NID2Q14112 1375 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ARFGEF1Q9Y6D6 1849 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 FOXN1O15353 648 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CBFA2T3O75081 653 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 COL6A2P12110 1019 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CDK7P50613 346 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 BNIP1Q12981 228 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 EIF2B5Q13144 721 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 TTLL12Q14166 644 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 C16orf72Q14CZ0 275 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PPP2R5BQ15173 497 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 AGBL2Q5U5Z8 902 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms