RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 SPG21Q9NZD8 308 aa13.96□□□□□ -0.17
COL6A1-205ENST00000492851 A0A087WZ62 844 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 SLC37A4O43826 429 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 TBX10O75333 385 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 GTF2F1P35269 517 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A1-205ENST00000492851 ALDH7A1P49419 539 aaKnown RBP13.95□□□□□ -0.18
COL6A1-205ENST00000492851 RAB27AP51159 221 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 AK2P54819 239 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 TRIM29Q14134 588 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A1-205ENST00000492851 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
COL6A1-205ENST00000492851 C4orf19Q8IY42 314 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 RNF169Q8NCN4 708 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 PGBD4Q96DM1 585 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 CEP170P1Q96L14 293 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 FDXACB1Q9BRP7 624 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-205ENST00000492851 ZSWIM4Q9H7M6 989 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 STK39Q9UEW8 545 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 VAV3Q9UKW4 847 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 NCOR1O75376 2440 aa13.95□□□□□ -0.18
COL6A1-205ENST00000492851 FSCN2O14926 492 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 LINC01565O15544 149 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 ZNF623O75123 536 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 CSPG5O95196 566 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 PHKA2P46019 1235 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 POLGP54098 1239 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-205ENST00000492851 ERVFC1P60507 584 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 NCBP1Q09161 790 aaKnown RBP13.94□□□□□ -0.18
COL6A1-205ENST00000492851 DRP2Q13474 957 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 CLUL1Q15846 466 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 DUSP6Q16828 381 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 TWF2Q6IBS0 349 aaKnown RBP13.94□□□□□ -0.18
COL6A1-205ENST00000492851 LRRC55Q6ZSA7 311 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 CATSPER4Q7RTX7 472 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 SRGAP1Q7Z6B7 1085 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 ADGRD2Q7Z7M1 963 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 ZNF598Q86UK7 904 aaKnown RBP13.94□□□□□ -0.18
COL6A1-205ENST00000492851 SMRP1Q8NCR6 262 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
COL6A1-205ENST00000492851 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL6A1-205ENST00000492851 FAM122AQ96E09 287 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 TCF25Q9BQ70 676 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 ENTPD7Q9NQZ7 604 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 CLEC1BQ9P126 229 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 PCDHA12Q9UN75 941 aa13.94□□□□□ -0.18
COL6A1-205ENST00000492851 MYH9P35579 1960 aaKnown RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 EML1O00423 815 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 ATF7P17544 494 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 GIT2Q14161 759 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 GLB1LQ6UWU2 654 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 HAS1Q92839 578 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 ZNF668Q96K58 619 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 NLRP4Q96MN2 994 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 PIN4Q9Y237 131 aaKnown RBP13.93□□□□□ -0.18
COL6A1-205ENST00000492851 COL4A3BPQ9Y5P4 624 aa13.93□□□□□ -0.18
COL6A1-205ENST00000492851 TMEM150BA6NC51 233 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 PER2O15055 1255 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 CTDNEP1O95476 244 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 FGFR4P22455 802 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 PLA2G5P39877 138 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 NEK4P51957 841 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 MXD4Q14582 209 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-205ENST00000492851 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
COL6A1-205ENST00000492851 ME3Q16798 604 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 CLLU1OSQ5K130 101 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 MRPL43Q8N983 215 aaKnown RBP13.92□□□□□ -0.18
COL6A1-205ENST00000492851 HELQQ8TDG4 1101 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 PRPF31Q8WWY3 499 aaKnown RBP13.92□□□□□ -0.18
COL6A1-205ENST00000492851 TMEM169Q96HH4 297 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 SH2D3AQ9BRG2 576 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 LXNQ9BS40 222 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 UBN1Q9NPG3 1134 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 C11orf16Q9NQ32 467 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 RNF19AQ9NV58 838 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 KANSL3Q9P2N6 904 aa13.92□□□□□ -0.18
COL6A1-205ENST00000492851 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 NPEPPSP55786 919 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 BCAR1P56945 870 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 HERC4Q5GLZ8 1057 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 PLPP4Q5VZY2 271 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 PLA2G4FQ68DD2 849 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms