RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 FERMT3Q86UX7 667 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 TMEM192Q8IY95 271 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 SLC17A8Q8NDX2 589 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 GDPD5Q8WTR4 605 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 CLP1Q92989 425 aaKnown RBP17.76■□□□□ 0.43
PKP4-214ENST00000492496 SNX21Q969T3 373 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 XPNPEP1Q9NQW7 623 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 MTUS1Q9ULD2 1270 aa17.76■□□□□ 0.43
PKP4-214ENST00000492496 RB1P06400 928 aa17.75■□□□□ 0.43
PKP4-214ENST00000492496 FGFR4P22455 802 aa17.75■□□□□ 0.43
PKP4-214ENST00000492496 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
PKP4-214ENST00000492496 POTEGQ6S5H5 508 aa17.75■□□□□ 0.43
PKP4-214ENST00000492496 DTHD1Q6ZMT9 781 aa17.75■□□□□ 0.43
PKP4-214ENST00000492496 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
PKP4-214ENST00000492496 CHD9Q3L8U1 2897 aa17.75■□□□□ 0.43
PKP4-214ENST00000492496 PRRC2BQ5JSZ5 2229 aaKnown RBP17.74■□□□□ 0.43
PKP4-214ENST00000492496 C5orf67F2Z3F1 127 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 H3BNC9 293 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 CSDE1O75534 798 aaKnown RBP17.74■□□□□ 0.43
PKP4-214ENST00000492496 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 SRGAP2CP0DJJ0 459 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 BMPR1AP36894 532 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
PKP4-214ENST00000492496 TFDP1Q14186 410 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 ARL6IP4Q66PJ3 421 aaKnown RBP17.74■□□□□ 0.43
PKP4-214ENST00000492496 TRAIPQ9BWF2 469 aa17.74■□□□□ 0.43
PKP4-214ENST00000492496 A0A087WWV3 80 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 A0A0U1RQF3 1178 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 HOXA2O43364 376 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 USO1O60763 962 aaKnown RBP17.73■□□□□ 0.43
PKP4-214ENST00000492496 CTNNB1P35222 781 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 ARL2P36404 184 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 PHKA2P46019 1235 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 PCBP1Q15365 356 aaKnown RBP eCLIP17.73■□□□□ 0.43
PKP4-214ENST00000492496 IL17AQ16552 155 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 CATSPER4Q7RTX7 472 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 ECHDC2Q86YB7 292 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 IFNLR1Q8IU57 520 aaPredicted RBP17.73■□□□□ 0.43
PKP4-214ENST00000492496 RNF149Q8NC42 400 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 MCPH1Q8NEM0 835 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 PLVAPQ9BX97 442 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 COL6A3P12111 3177 aa17.73■□□□□ 0.43
PKP4-214ENST00000492496 VPS37CA5D8V6 355 aaPredicted RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 ARHGEF35A5YM69 484 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 EOMESO95936 686 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 BMP15O95972 392 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 SKIP12755 728 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 GPM6BQ13491 265 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 CCDC85BQ15834 202 aaPredicted RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 ECM1Q16610 540 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 PAN2Q504Q3 1202 aaKnown RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 NAALADL2Q58DX5 795 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 KRT79Q5XKE5 535 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
PKP4-214ENST00000492496 PPM1EQ8WY54 764 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 C11orf84Q9BUA3 381 aaPredicted RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 NFKBIZQ9BYH8 718 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 AGPAT5Q9NUQ2 364 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 PIN4Q9Y237 131 aaKnown RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 MRPL42Q9Y6G3 142 aaKnown RBP17.72■□□□□ 0.43
PKP4-214ENST00000492496 ATG2AQ2TAZ0 1938 aa17.72■□□□□ 0.43
PKP4-214ENST00000492496 CHD7Q9P2D1 2997 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 SYT1P21579 422 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 GATMP50440 423 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 PTENP60484 403 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 PTPROQ16827 1216 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 FAM102BQ5T8I3 360 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 TWF2Q6IBS0 349 aaKnown RBP17.71■□□□□ 0.43
PKP4-214ENST00000492496 ZNF598Q86UK7 904 aaKnown RBP17.71■□□□□ 0.43
PKP4-214ENST00000492496 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 KCTD17Q8N5Z5 321 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 ASAP3Q8TDY4 903 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 RSPH1Q8WYR4 309 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 P2RX5Q93086 422 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 MRPL38Q96DV4 380 aaKnown RBP17.71■□□□□ 0.43
PKP4-214ENST00000492496 POLR3FQ9H1D9 316 aaPredicted RBP17.71■□□□□ 0.43
PKP4-214ENST00000492496 MINDY3Q9H8M7 445 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.43
PKP4-214ENST00000492496 TBKBP1A7MCY6 615 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 FGFR1P11362 822 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 CYP11B2P19099 503 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 GLRA2P23416 452 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 AXLP30530 894 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 RAB27AP51159 221 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 CAPSQ13938 189 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 PADI6Q6TGC4 694 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 HSCBQ8IWL3 235 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 TMEM117Q9H0C3 514 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 LMAN2LQ9H0V9 348 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
PKP4-214ENST00000492496 RNF19AQ9NV58 838 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 MYH15Q9Y2K3 1946 aa17.7■□□□□ 0.42
PKP4-214ENST00000492496 PLXNA4Q9HCM2 1894 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 PP2D1A8MPX8 630 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 ZNF623O75123 536 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms