RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 SERPINB12Q96P63 405 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ISCA1Q9BUE6 129 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 MYLK2Q9H1R3 596 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 MMADHCQ9H3L0 296 aaPredicted RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SEMA4AQ9H3S1 761 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 GOLPH3Q9H4A6 298 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 NAGPAQ9UK23 515 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 DBR1Q9UK59 544 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 H0Y3Z8 333 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 PODXLO00592 558 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 TRAFD1O14545 582 aaPredicted RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 HNRNPCL1O60812 293 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ATP9AO75110 1047 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 DCTN3O75935 186 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 TJP3O95049 919 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 PCP11498 1178 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 STX2P32856 288 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SERPINB4P48594 390 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 YARSP54577 528 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 FKBP3Q00688 224 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 PTK2Q05397 1052 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 MAPK7Q13164 816 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 CCDC6Q16204 474 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ENOX2Q16206 610 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 TXNRD1Q16881 649 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SOGA3Q5TF21 947 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 CGB2Q6NT52 195 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ALKBH5Q6P6C2 394 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 VSTM1Q6UX27 236 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 FAM205AQ6ZU69 1335 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ZNF365Q70YC5 407 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 VPS36Q86VN1 386 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 VGLL2Q8N8G2 317 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 PHC3Q8NDX5 983 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SUPT20HQ8NEM7 779 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 HPS3Q969F9 1004 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 CALML4Q96GE6 196 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 DCAF5Q96JK2 942 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 CEP63Q96MT8 703 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 TBC1D10AQ9BXI6 508 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 CARD9Q9H257 536 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 GANQ9H2C0 597 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 TAOK3Q9H2K8 898 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ZBTB3Q9H5J0 574 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 CNNM1Q9NRU3 951 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 GRHL1Q9NZI5 618 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SNX24Q9Y343 169 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 USH1CQ9Y6N9 552 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CETN3O15182 167 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 MAPK13O15264 365 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PDE8BO95263 885 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 H2AFZP0C0S5 128 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 OR52Z1P0C646 297 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 HSPA6P17066 643 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 RASA1P20936 1047 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 STRN3Q13033 797 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 SH2D4BQ5SQS7 431 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 GALNT17Q6IS24 598 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 H2AFVQ71UI9 128 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 TRMT10CQ7L0Y3 403 aaKnown RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ZNF571Q7Z3V5 609 aaPredicted RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 SYCP3Q8IZU3 236 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 DAGLBQ8NCG7 672 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 GATA6Q92908 595 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 NR1H4Q96RI1 486 aaPredicted RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 TSPAN18Q96SJ8 248 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 LRRC27Q9C0I9 530 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 TLE6Q9H808 572 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 STK17AQ9UEE5 414 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 COMMD3-BMI1R4GMX3 469 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 M0R2N6 131 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 SMAPO00193 183 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ADAMTS3O15072 1205 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CYP27B1O15528 508 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 DESP17661 470 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 TARSP26639 723 aaKnown RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 MARK3P27448 753 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CHRNA3P32297 505 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ABCD1P33897 745 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PRKCIP41743 596 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PTPROQ16827 1216 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CNPY1Q3B7I2 92 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PPP1R21Q6ZMI0 780 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 IRF2BP2Q7Z5L9 587 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ZC3H18Q86VM9 953 aaKnown RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ANKRD42Q8N9B4 389 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PPFIBP2Q8ND30 876 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 STKLD1Q8NE28 680 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 TTC8Q8TAM2 541 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 ERP27Q96DN0 273 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 RBM17Q96I25 401 aaKnown RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 LRRC37BQ96QE4 947 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PITPNM3Q9BZ71 974 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 MIS12Q9H081 205 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms