RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 DAPK3O43293 454 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 IPO13O94829 963 aaKnown RBP6.2□□□□□ -1.42
PHC3-213ENST00000491258 TTC38Q5R3I4 469 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 OTOP1Q7RTM1 612 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 PROKR1Q8TCW9 393 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 LENG9Q96B70 501 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 ZNF512Q96ME7 567 aaPredicted RBP6.2□□□□□ -1.42
PHC3-213ENST00000491258 DEPDC7Q96QD5 511 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 TRPS1Q9UHF7 1281 aa6.2□□□□□ -1.42
PHC3-213ENST00000491258 FAM221BA6H8Z2 402 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 RHOBTB3O94955 611 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 JUNP05412 331 aaKnown RBP6.19□□□□□ -1.42
PHC3-213ENST00000491258 HNRNPLP14866 589 aaKnown RBP eCLIP6.19□□□□□ -1.42
PHC3-213ENST00000491258 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 PROZP22891 400 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 RASA3Q14644 834 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 PTPAQ15257 358 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 ARHGAP44Q17R89 818 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 KCNV1Q6PIU1 500 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 TUBGCP5Q96RT8 1024 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 TANGO6Q9C0B7 1094 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 PCIF1Q9H4Z3 704 aa6.19□□□□□ -1.42
PHC3-213ENST00000491258 M0R2C6 588 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 LMO1P25800 156 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 ADRA1BP35368 520 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 NPEPPSP55786 919 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 NAALADL2Q58DX5 795 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 LY6G5CQ5SRR4 150 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 C1QL3Q5VWW1 255 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 HTR3DQ70Z44 454 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 MDGA1Q8NFP4 955 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 MRPL4Q9BYD3 311 aaKnown RBP6.18□□□□□ -1.42
PHC3-213ENST00000491258 ACSS2Q9NR19 701 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 ZNHIT2Q9UHR6 403 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 SORCS3Q9UPU3 1222 aa6.18□□□□□ -1.42
PHC3-213ENST00000491258 DVL2O14641 736 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 ABHD16AO95870 558 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 LMNAP02545 664 aaKnown RBP6.17□□□□□ -1.42
PHC3-213ENST00000491258 GNAT2P19087 354 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 HNRNPA0Q13151 305 aaKnown RBP6.17□□□□□ -1.42
PHC3-213ENST00000491258 RHOUQ7L0Q8 258 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 BMP8AQ7Z5Y6 402 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 DDX53Q86TM3 631 aaKnown RBP6.17□□□□□ -1.42
PHC3-213ENST00000491258 CMTM4Q8IZR5 234 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 ZSWIM2Q8NEG5 633 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 CPT1CQ8TCG5 803 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 ST8SIA2Q92186 375 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 RPGRQ92834 1020 aaKnown RBP6.17□□□□□ -1.42
PHC3-213ENST00000491258 DNAJC7Q99615 494 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 C14orf93Q9H972 538 aaKnown RBP6.17□□□□□ -1.42
PHC3-213ENST00000491258 SNTG2Q9NY99 539 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 FZD1Q9UP38 647 aa6.17□□□□□ -1.42
PHC3-213ENST00000491258 STC2O76061 302 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 ITGB1P05556 798 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 HK1P19367 917 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 NR4A1P22736 598 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
PHC3-213ENST00000491258 RBM25P49756 843 aaKnown RBP6.16□□□□□ -1.42
PHC3-213ENST00000491258 MECP2P51608 486 aaKnown RBP6.16□□□□□ -1.42
PHC3-213ENST00000491258 SPIDRQ14159 915 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 FAM193BQ96PV7 902 aaPredicted RBP6.16□□□□□ -1.42
PHC3-213ENST00000491258 RIOX1Q9H6W3 641 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 TRIM39Q9HCM9 518 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 SAMD15Q9P1V8 674 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 PACSIN3Q9UKS6 424 aa6.16□□□□□ -1.42
PHC3-213ENST00000491258 CCDC163A0A0D9SF12 145 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 GRXCR1A8MXD5 290 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 KCNQ2O43526 872 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 GLRX3O76003 335 aaKnown RBP6.15□□□□□ -1.42
PHC3-213ENST00000491258 IL12RB1P42701 662 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 KIR2DL3P43628 341 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 BCAR1P56945 870 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 SERINC3Q13530 473 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 MYBPC3Q14896 1274 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 CCDC142Q17RM4 750 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 LRRC55Q6ZSA7 311 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 LRP10Q7Z4F1 713 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 KIAA1958Q8N8K9 716 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 CHST14Q8NCH0 376 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 HIRIP3Q9BW71 556 aaPredicted RBP6.15□□□□□ -1.42
PHC3-213ENST00000491258 SYNPO2Q9UMS6 1093 aa6.15□□□□□ -1.42
PHC3-213ENST00000491258 CCDC9Q9Y3X0 531 aaKnown RBP6.15□□□□□ -1.42
PHC3-213ENST00000491258 NISCHQ9Y2I1 1504 aa6.15□□□□□ -1.43
PHC3-213ENST00000491258 PTPDC1A2A3K4 754 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 H7C1D1 291 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 PPFIA4O75335 1185 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 SCAF4O95104 1147 aaKnown RBP6.14□□□□□ -1.43
PHC3-213ENST00000491258 CYP17A1P05093 508 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 MRPS21P82921 87 aaKnown RBP6.14□□□□□ -1.43
PHC3-213ENST00000491258 ZNF174Q15697 407 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 FAM214AQ32MH5 1076 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 TIGD2Q4W5G0 525 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 THAP3Q8WTV1 239 aaPredicted RBP6.14□□□□□ -1.43
PHC3-213ENST00000491258 C16orf92Q96LL3 132 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 UIMC1Q96RL1 719 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 PTGFRNQ9P2B2 879 aa6.14□□□□□ -1.43
PHC3-213ENST00000491258 GRID2IPA4D2P6 1211 aa6.13□□□□□ -1.43
PHC3-213ENST00000491258 B4E1Z4 1266 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms