RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 PAEPP09466 180 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 FNTAP49354 379 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 PRR16Q569H4 304 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 SLFN13Q68D06 897 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 MKNK1Q9BUB5 465 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 GOLPH3Q9H4A6 298 aa13.34□□□□□ -0.27
FXR1-220ENST00000491062 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 MEIS1O00470 390 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
FXR1-220ENST00000491062 TMEM253P0C7T8 217 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 LMNB1P20700 586 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 STAT1P42224 750 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
FXR1-220ENST00000491062 TMC3Q7Z5M5 1100 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 FMNL3Q8IVF7 1028 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 OTUD6BQ8N6M0 293 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
FXR1-220ENST00000491062 UIMC1Q96RL1 719 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 CCT8L2Q96SF2 557 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 RUSC1Q9BVN2 902 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 AP1M1Q9BXS5 423 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 DDX47Q9H0S4 455 aaKnown RBP13.33□□□□□ -0.28
FXR1-220ENST00000491062 FAM114A2Q9NRY5 505 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 ZNF646O15015 1829 aaPredicted RBP13.33□□□□□ -0.28
FXR1-220ENST00000491062 FRMPD4Q14CM0 1322 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 LOXHD1Q8IVV2 1947 aa13.33□□□□□ -0.28
FXR1-220ENST00000491062 TMCO5BA8MYB1 307 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 F8VZ95 297 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 MYO1FO00160 1098 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 TGFB1I1O43294 461 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 CFHP08603 1231 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 CYP3A4P08684 503 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 EEF2P13639 858 aaKnown RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 GUCY2CP25092 1073 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 CTNNA1P35221 906 aaKnown RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 SOX5P35711 763 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 USP8P40818 1118 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 CASP4P49662 377 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 DRP2Q13474 957 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 TCERG1LQ5VWI1 586 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 APOBEC3HQ6NTF7 200 aaKnown RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 C6orf89Q6UWU4 347 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 TEX2Q8IWB9 1127 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 RFFLQ8WZ73 363 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 TEKT1Q969V4 418 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 AMFRQ9UKV5 643 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 FAM86B1E9PN63 330 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 F8W031 263 aaPredicted RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 MSH4O15457 936 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 GCNT3O95395 438 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 FAM86B2P0C5J1 330 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 GTF2A1P52655 376 aaPredicted RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 GALCP54803 685 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 HDLBPQ00341 1268 aaKnown RBP13.32□□□□□ -0.28
FXR1-220ENST00000491062 KCNV1Q6PIU1 500 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
FXR1-220ENST00000491062 GMCL1P1Q8NEA9 526 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 TXLNGYQ9BZA5 131 aa13.32□□□□□ -0.28
FXR1-220ENST00000491062 C5orf60A6NFR6 353 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 DDX3YO15523 660 aaKnown RBP13.31□□□□□ -0.28
FXR1-220ENST00000491062 TRAPPC3O43617 180 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 PPFIA2O75334 1257 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 ITGA4P13612 1032 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 HNRNPH1P31943 449 aaKnown RBP13.31□□□□□ -0.28
FXR1-220ENST00000491062 PSMC2P35998 433 aaKnown RBP13.31□□□□□ -0.28
FXR1-220ENST00000491062 PPATQ06203 517 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 NFIAQ12857 509 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 CLUL1Q15846 466 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 DAAM2Q86T65 1068 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 FBXO11Q86XK2 927 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 FAM186BQ8IYM0 893 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 ATP8B4Q8TF62 1192 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 CYFIP2Q96F07 1278 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
FXR1-220ENST00000491062 STK33Q9BYT3 514 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 BHMT2Q9H2M3 363 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 AMACRQ9UHK6 382 aa13.31□□□□□ -0.28
FXR1-220ENST00000491062 TTI1O43156 1089 aa13.3□□□□□ -0.28
FXR1-220ENST00000491062 DAPK3O43293 454 aa13.3□□□□□ -0.28
FXR1-220ENST00000491062 PPP1R12BO60237 982 aaPredicted RBP13.3□□□□□ -0.28
FXR1-220ENST00000491062 BUB1BO60566 1050 aaPredicted RBP13.3□□□□□ -0.28
FXR1-220ENST00000491062 GCGRP47871 477 aa13.3□□□□□ -0.28
FXR1-220ENST00000491062 FMO5P49326 533 aa13.3□□□□□ -0.28
FXR1-220ENST00000491062 SEC24CP53992 1094 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms