RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 COPB2P35606 906 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 PSMC5P62195 406 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 KCNMA1Q12791 1236 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 MTMR3Q13615 1198 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 RAPGEF1Q13905 1077 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 NAA30Q147X3 362 aaPredicted RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 GNPTABQ3T906 1256 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ODR4Q5SWX8 454 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 CFAP58Q5T655 872 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ZNF746Q6NUN9 644 aaPredicted RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 C8orf74Q6P047 294 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ALKBH5Q6P6C2 394 aaKnown RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 CEP128Q6ZU80 1094 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 CREG2Q8IUH2 290 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ZFPM1Q8IX07 1006 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 EFCAB13Q8IY85 973 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ARFGAP2Q8N6H7 521 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 MCPH1Q8NEM0 835 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ACTRT1Q8TDG2 376 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 MAIP1Q8WWC4 291 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 CTNNBL1Q8WYA6 563 aaPredicted RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 CAVIN3Q969G5 261 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 LRRC45Q96CN5 670 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 GPRASP2Q96D09 838 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 NTPCRQ9BSD7 190 aaKnown RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 WDR18Q9BV38 432 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 TAOK3Q9H2K8 898 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 DMAC2Q9NW81 257 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 ZNF446Q9NWS9 450 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 HOXC10Q9NYD6 342 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 STIM2Q9P246 746 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 SUCLA2Q9P2R7 463 aaPredicted RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 CCPG1Q9ULG6 757 aa6.9□□□□□ -1.3
FN1-223ENST00000490833 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
FN1-223ENST00000490833 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 LOC102724159A0A0B4J2E5 919 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 ANKRD62A6NC57 917 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SRRM3A6NNA2 597 aaPredicted RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 TCP10L2B9ZVM9 353 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 C21orf2O43822 256 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 EXOC3O60645 756 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 RPS6KA5O75582 802 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 GDF11O95390 407 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 LDHAP00338 332 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 ATP1A1P05023 1023 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 RHOXF2BP0C7M4 288 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 TMEM253P0C7T8 217 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 PLS3P13797 630 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 TNFAIP3P21580 790 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 CCND2P30279 289 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 CYP2C19P33261 490 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SOX5P35711 763 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 PLA2G4AP47712 749 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 AP3M2P53677 418 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 MFAP3P55082 362 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 HADHBP55084 474 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 ZNF280AP59817 542 aaPredicted RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 RASSF7Q02833 373 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 MTMR1Q13613 665 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 PWP2Q15269 919 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 LRRC41Q15345 812 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 ECM1Q16610 540 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SUPT20HL1Q3ZLR7 823 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 DALRD3Q5D0E6 543 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 ZNF697Q5TEC3 545 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 MEI1Q5TIA1 1274 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 HGSNATQ68CP4 663 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 KCNV1Q6PIU1 500 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 B3GNT9Q6UX72 402 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 TRIM67Q6ZTA4 783 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 KCNK18Q7Z418 384 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 IRF2BP2Q7Z5L9 587 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SFR1Q86XK3 245 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 APOBEC3FQ8IUX4 373 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 NELFCDQ8IXH7 590 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 CNPY4Q8N129 248 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 UBL4BQ8N7F7 174 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 ANKLE1Q8NAG6 615 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 XXYLT1Q8NBI6 393 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 NSUN6Q8TEA1 469 aaKnown RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 SPIRE2Q8WWL2 714 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 CCDC102AQ96A19 550 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SLC35C1Q96A29 364 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 ZBED3Q96IU2 234 aaPredicted RBP6.89□□□□□ -1.31
FN1-223ENST00000490833 CAMKK2Q96RR4 588 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 RHOXF2Q9BQY4 288 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 LACRTQ9GZZ8 138 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 ZMYND15Q9H091 742 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 RAB17Q9H0T7 212 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SLITRK6Q9H5Y7 841 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 SLC38A10Q9HBR0 1119 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 ABCB6Q9NP58 842 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 PICK1Q9NRD5 415 aa6.89□□□□□ -1.31
FN1-223ENST00000490833 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms