RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 KCNA5P22460 613 aa35.05■■■■□ 3.2
LDB1-204ENST00000490751 SFPQP23246 707 aaKnown RBP eCLIP35.05■■■■□ 3.2
LDB1-204ENST00000490751 NEK9Q8TD19 979 aa35.05■■■■□ 3.2
LDB1-204ENST00000490751 TMEM143Q96AN5 459 aa35.05■■■■□ 3.2
LDB1-204ENST00000490751 RNF19AQ9NV58 838 aa35.05■■■■□ 3.2
LDB1-204ENST00000490751 HCSTQ9UBK5 93 aa35.05■■■■□ 3.2
LDB1-204ENST00000490751 HOXA2O43364 376 aa35.04■■■■□ 3.2
LDB1-204ENST00000490751 SPPL3Q8TCT6 385 aa35.04■■■■□ 3.2
LDB1-204ENST00000490751 HSD17B14Q9BPX1 270 aa35.04■■■■□ 3.2
LDB1-204ENST00000490751 TMEM117Q9H0C3 514 aa35.04■■■■□ 3.2
LDB1-204ENST00000490751 DACT1Q9NYF0 836 aa35.04■■■■□ 3.2
LDB1-204ENST00000490751 CAMK1Q14012 370 aa35.03■■■■□ 3.2
LDB1-204ENST00000490751 EMC2Q15006 297 aa35.03■■■■□ 3.2
LDB1-204ENST00000490751 RNF169Q8NCN4 708 aa35.03■■■■□ 3.2
LDB1-204ENST00000490751 PSPC1Q8WXF1 523 aaKnown RBP35.03■■■■□ 3.2
LDB1-204ENST00000490751 CHST12Q9NRB3 414 aa35.03■■■■□ 3.2
LDB1-204ENST00000490751 AAASQ9NRG9 546 aa35.03■■■■□ 3.2
LDB1-204ENST00000490751 TYW1Q9NV66 732 aaKnown RBP35.03■■■■□ 3.2
LDB1-204ENST00000490751 A0A0U1RQF3 1178 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 POTEMA6NI47 508 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 ST18O60284 1047 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 LYPLA2O95372 231 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 DNAJB1P25685 340 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 GNL2Q13823 731 aaKnown RBP35.02■■■■□ 3.2
LDB1-204ENST00000490751 PRPF31Q8WWY3 499 aaKnown RBP35.02■■■■□ 3.2
LDB1-204ENST00000490751 CASD1Q96PB1 797 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 UPF2Q9HAU5 1272 aaKnown RBP35.02■■■■□ 3.2
LDB1-204ENST00000490751 IFT122Q9HBG6 1241 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 PCDHB12Q9Y5F1 795 aa35.02■■■■□ 3.2
LDB1-204ENST00000490751 GAS2O43903 313 aaKnown RBP35.01■■■■□ 3.2
LDB1-204ENST00000490751 CATSPER4Q7RTX7 472 aa35.01■■■■□ 3.2
LDB1-204ENST00000490751 ABI1Q8IZP0 508 aa35.01■■■■□ 3.2
LDB1-204ENST00000490751 POF1BQ8WVV4 589 aa35.01■■■■□ 3.2
LDB1-204ENST00000490751 TCP11Q8WWU5 503 aa35.01■■■■□ 3.2
LDB1-204ENST00000490751 PABPC5Q96DU9 382 aaKnown RBP35.01■■■■□ 3.2
LDB1-204ENST00000490751 CWH43Q9H720 699 aa35.01■■■■□ 3.2
LDB1-204ENST00000490751 PIN4Q9Y237 131 aaKnown RBP35.01■■■■□ 3.2
LDB1-204ENST00000490751 LEXMQ3ZCV2 418 aa35■■■■□ 3.19
LDB1-204ENST00000490751 EP400NLQ6ZTU2 488 aa35■■■■□ 3.19
LDB1-204ENST00000490751 ZNF598Q86UK7 904 aaKnown RBP35■■■■□ 3.19
LDB1-204ENST00000490751 MTRQ99707 1265 aa35■■■■□ 3.19
LDB1-204ENST00000490751 MUC3AQ02505 3323 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 SRGAP2CP0DJJ0 459 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 ATF7P17544 494 aaPredicted RBP34.99■■■■□ 3.19
LDB1-204ENST00000490751 LAMTOR4Q0VGL1 99 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 ORC2Q13416 577 aaPredicted RBP34.99■■■■□ 3.19
LDB1-204ENST00000490751 COL19A1Q14993 1142 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 ZNF174Q15697 407 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 TWF2Q6IBS0 349 aaKnown RBP34.99■■■■□ 3.19
LDB1-204ENST00000490751 NOSTRINQ8IVI9 506 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 COLGALT1Q8NBJ5 622 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 ANKEF1Q9NU02 776 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 CLDND1Q9NY35 253 aa34.99■■■■□ 3.19
LDB1-204ENST00000490751 EOMESO95936 686 aa34.98■■■■□ 3.19
LDB1-204ENST00000490751 LAG3P18627 525 aa34.98■■■■□ 3.19
LDB1-204ENST00000490751 HYAL1Q12794 435 aa34.98■■■■□ 3.19
LDB1-204ENST00000490751 CLLU1OSQ5K130 101 aa34.98■■■■□ 3.19
LDB1-204ENST00000490751 LRRC43Q8N309 656 aa34.98■■■■□ 3.19
LDB1-204ENST00000490751 CCDC43Q96MW1 224 aaKnown RBP34.98■■■■□ 3.19
LDB1-204ENST00000490751 XPNPEP1Q9NQW7 623 aa34.98■■■■□ 3.19
LDB1-204ENST00000490751 H3BQ06 376 aaPredicted RBP34.97■■■■□ 3.19
LDB1-204ENST00000490751 OR52Z1P0C646 297 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 IRS1P35568 1242 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 PHKA2P46019 1235 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 TTC38Q5R3I4 469 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 LRRC55Q6ZSA7 311 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 FERMT3Q86UX7 667 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 THNSL1Q8IYQ7 743 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 GADD45GIP1Q8TAE8 222 aaPredicted RBP34.97■■■■□ 3.19
LDB1-204ENST00000490751 TRAIPQ9BWF2 469 aa34.97■■■■□ 3.19
LDB1-204ENST00000490751 NCK2O43639 380 aa34.96■■■■□ 3.19
LDB1-204ENST00000490751 FGF18O76093 207 aa34.96■■■■□ 3.19
LDB1-204ENST00000490751 CSPP1Q1MSJ5 1256 aa34.96■■■■□ 3.19
LDB1-204ENST00000490751 SRGAP1Q7Z6B7 1085 aa34.96■■■■□ 3.19
LDB1-204ENST00000490751 HELQQ8TDG4 1101 aa34.96■■■■□ 3.19
LDB1-204ENST00000490751 NOL7Q9UMY1 257 aaKnown RBP34.96■■■■□ 3.19
LDB1-204ENST00000490751 NCOR1O75376 2440 aa34.96■■■■□ 3.19
LDB1-204ENST00000490751 ASAP2O43150 1006 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 TECP42680 631 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 RARRES1P49788 294 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 RNF149Q8NC42 400 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 PIGOQ8TEQ8 1089 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 MINDY3Q9H8M7 445 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 AGPAT5Q9NUQ2 364 aa34.95■■■■□ 3.19
LDB1-204ENST00000490751 A0A087WWV3 80 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 DGAT1O75907 488 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 SPATA31C1P0DKV0 1188 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 TRAPPC10P48553 1259 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 UBE3AQ05086 875 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 PPP2R3CQ969Q6 453 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 IGFLR1Q9H665 355 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 FAM105AQ9NUU6 356 aa34.94■■■■□ 3.18
LDB1-204ENST00000490751 CD2BP2O95400 341 aaKnown RBP34.93■■■■□ 3.18
LDB1-204ENST00000490751 SKIP12755 728 aa34.93■■■■□ 3.18
LDB1-204ENST00000490751 GTF2F1P35269 517 aaKnown RBP eCLIP34.93■■■■□ 3.182e-6■■■■□ 24.5
LDB1-204ENST00000490751 CTC1Q2NKJ3 1217 aa34.93■■■■□ 3.18
LDB1-204ENST00000490751 PTCRAQ6ISU1 281 aaPredicted RBP34.93■■■■□ 3.18
LDB1-204ENST00000490751 ADGRD2Q7Z7M1 963 aa34.93■■■■□ 3.18
LDB1-204ENST00000490751 TMX3Q96JJ7 454 aa34.93■■■■□ 3.18
LDB1-204ENST00000490751 TUFT1Q9NNX1 390 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms