RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 ST3GAL5Q9UNP4 418 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 MICAL3Q7RTP6 2002 aa15.97■□□□□ 0.15
SRGAP3-208ENST00000490348 ABHD14A-ACY1A0A1B0GW23 586 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 ZBBXA8MT70 800 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 GRXCR1A8MXD5 290 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 MGEA5O60502 916 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 RPS6KA5O75582 802 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 ACTN1P12814 892 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 MAPK7Q13164 816 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 IKBKEQ14164 716 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 MCM6Q14566 821 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 RTN4RL1Q86UN2 441 aaPredicted RBP15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 RNF149Q8NC42 400 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 APBB2Q92870 758 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 SPATA32Q96LK8 384 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 PTPRSQ13332 1948 aa15.96■□□□□ 0.15
SRGAP3-208ENST00000490348 NPHP3-ACAD11A0A0J9YXS1 232 aa15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 CDC42EP1Q00587 391 aa15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 NFX1Q12986 1120 aaKnown RBP15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 MXD4Q14582 209 aaPredicted RBP15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 SCLT1Q96NL6 688 aa15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 GCOM2Q9BZD3 368 aaPredicted RBP15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 SLC4A7Q9Y6M7 1214 aa15.96■□□□□ 0.14
SRGAP3-208ENST00000490348 ASAP2O43150 1006 aa15.95■□□□□ 0.14
SRGAP3-208ENST00000490348 GUCY2CP25092 1073 aa15.95■□□□□ 0.14
SRGAP3-208ENST00000490348 RAD51AP2Q09MP3 1159 aa15.95■□□□□ 0.14
SRGAP3-208ENST00000490348 E2F4Q16254 413 aa15.95■□□□□ 0.14
SRGAP3-208ENST00000490348 RESP18Q5W5W9 173 aa15.95■□□□□ 0.14
SRGAP3-208ENST00000490348 LARP4BQ92615 738 aaKnown RBP15.95■□□□□ 0.14
SRGAP3-208ENST00000490348 ENPP3O14638 875 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 GPR182O15218 404 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 HIP1RO75146 1068 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 ATP2A2P16615 1042 aaKnown RBP15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 TXLNAP40222 546 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 PTENP60484 403 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 DHX8Q14562 1220 aaKnown RBP15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 RRAGBQ5VZM2 374 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 PDILTQ8N807 584 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 SCAND2PQ9GZW5 306 aaPredicted RBP15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 TSPYL2Q9H2G4 693 aaPredicted RBP15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 ADGRA3Q8IWK6 1321 aa15.94■□□□□ 0.14
SRGAP3-208ENST00000490348 COL6A3P12111 3177 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 MBTD1Q05BQ5 628 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 POU5F1BQ06416 359 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 DSC3Q14574 896 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 CDCA2Q69YH5 1023 aaPredicted RBP15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 GPBP1Q86WP2 473 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 CRIPAKQ8N1N5 446 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 KIFAP3Q92845 792 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 LRCH3Q96II8 777 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 KIFC3Q9BVG8 833 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 NFKBIZQ9BYH8 718 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 KCND2Q9NZV8 630 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 STK17AQ9UEE5 414 aa15.93■□□□□ 0.14
SRGAP3-208ENST00000490348 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 EFCAB14O75071 495 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 PBX2P40425 430 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 STAT6P42226 847 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 KCNJ6P48051 423 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 RABGGTBP53611 331 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 AMHR2Q16671 573 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 ADALQ6DHV7 355 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 CCDC73Q6ZRK6 1079 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 SRGAP1Q7Z6B7 1085 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 HERC6Q8IVU3 1022 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 IPO9Q96P70 1041 aaKnown RBP15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 REEP2Q9BRK0 252 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 FTHL17Q9BXU8 183 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 CHMP5Q9NZZ3 219 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 TTC3P53804 2025 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 REV3LO60673 3130 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 LRRIQ4A6NIV6 560 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 MYOGP15173 224 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 SFPQP23246 707 aaKnown RBP eCLIP15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 HOXA11P31270 313 aaPredicted RBP15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 PHKA2P46019 1235 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 FXR1P51114 621 aaKnown RBP eCLIP15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 TFDP1Q14186 410 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 MYOCDQ8IZQ8 938 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 PHOSPHO2Q8TCD6 241 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 SLC9A7Q96T83 725 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 ADAM2Q99965 735 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 PBX4Q9BYU1 374 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 RGS18Q9NS28 235 aa15.92■□□□□ 0.14
SRGAP3-208ENST00000490348 PRUNE2Q8WUY3 3088 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 MYMKA6NI61 221 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 POLR2DO15514 142 aaKnown RBP15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 GJB5O95377 273 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 EDN1P05305 212 aa15.91■□□□□ 0.14
SRGAP3-208ENST00000490348 CMA1P23946 247 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms