RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TTC3P53804 2025 aa21.29■■□□□ 1
EPHB4-207ENST00000489808 ADGRA3Q8IWK6 1321 aa21.29■■□□□ 1
EPHB4-207ENST00000489808 VPS37CA5D8V6 355 aaPredicted RBP21.28■■□□□ 1
EPHB4-207ENST00000489808 GTPBP6O43824 516 aaPredicted RBP21.28■■□□□ 1
EPHB4-207ENST00000489808 SRGAP1Q7Z6B7 1085 aa21.28■■□□□ 1
EPHB4-207ENST00000489808 RNF149Q8NC42 400 aa21.28■■□□□ 1
EPHB4-207ENST00000489808 FBXO22Q8NEZ5 403 aa21.28■■□□□ 1
EPHB4-207ENST00000489808 TMEM161AQ9NX61 479 aa21.28■■□□□ 1
EPHB4-207ENST00000489808 KIAA1024Q9UPX6 916 aa21.28■■□□□ 1
EPHB4-207ENST00000489808 A0A0U1RQF3 1178 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 LINC00271P0C7V0 271 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 CDC25AP30304 524 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 BMPR1AP36894 532 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 POU5F1BQ06416 359 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 FAM102BQ5T8I3 360 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 KRT79Q5XKE5 535 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 ARL6IP4Q66PJ3 421 aaKnown RBP21.27■■□□□ 1
EPHB4-207ENST00000489808 CATSPER4Q7RTX7 472 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 CMTR2Q8IYT2 770 aaKnown RBP21.27■■□□□ 1
EPHB4-207ENST00000489808 SLC17A8Q8NDX2 589 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 SNX29Q8TEQ0 813 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 PPM1EQ8WY54 764 aa21.27■■□□□ 1
EPHB4-207ENST00000489808 CLP1Q92989 425 aaKnown RBP21.27■■□□□ 1
EPHB4-207ENST00000489808 ARHGEF35A5YM69 484 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 PP2D1A8MPX8 630 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 USO1O60763 962 aaKnown RBP21.26■□□□□ 0.99
EPHB4-207ENST00000489808 GATMP50440 423 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 CCDC85BQ15834 202 aaPredicted RBP21.26■□□□□ 0.99
EPHB4-207ENST00000489808 ECHDC2Q86YB7 292 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 ASAP3Q8TDY4 903 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 GDPD5Q8WTR4 605 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 MMTAG2Q9BU76 263 aaKnown RBP21.26■□□□□ 0.99
EPHB4-207ENST00000489808 MINDY3Q9H8M7 445 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 DACT1Q9NYF0 836 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 LMCD1Q9NZU5 365 aa21.26■□□□□ 0.99
EPHB4-207ENST00000489808 H3BNC9 293 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 EOMESO95936 686 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 RB1P06400 928 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 CYP11B2P19099 503 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 GLRA2P23416 452 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 PTENP60484 403 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 TFDP1Q14186 410 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 PADI6Q6TGC4 694 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 MAEAQ7L5Y9 396 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 HSCBQ8IWL3 235 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 MCPH1Q8NEM0 835 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 TRAIPQ9BWF2 469 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 DDX19AQ9NUU7 478 aaKnown RBP21.25■□□□□ 0.99
EPHB4-207ENST00000489808 RWDD3Q9Y3V2 267 aa21.25■□□□□ 0.99
EPHB4-207ENST00000489808 MRPL42Q9Y6G3 142 aaKnown RBP21.25■□□□□ 0.99
EPHB4-207ENST00000489808 EYSQ5T1H1 3165 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 VWA3AA6NCI4 1184 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 TBKBP1A7MCY6 615 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 C5orf67F2Z3F1 127 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 BMP15O95972 392 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 PHKA2P46019 1235 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 GPM6BQ13491 265 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 PAN2Q504Q3 1202 aaKnown RBP21.24■□□□□ 0.99
EPHB4-207ENST00000489808 ZNF598Q86UK7 904 aaKnown RBP21.24■□□□□ 0.99
EPHB4-207ENST00000489808 IFNLR1Q8IU57 520 aaPredicted RBP21.24■□□□□ 0.99
EPHB4-207ENST00000489808 POLR3FQ9H1D9 316 aaPredicted RBP21.24■□□□□ 0.99
EPHB4-207ENST00000489808 BHMT2Q9H2M3 363 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 GPRC5CQ9NQ84 441 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 DNM3Q9UQ16 869 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 MTMR6Q9Y217 621 aa21.24■□□□□ 0.99
EPHB4-207ENST00000489808 PIN4Q9Y237 131 aaKnown RBP21.24■□□□□ 0.99
EPHB4-207ENST00000489808 FGFR1P11362 822 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 HOXA11P31270 313 aaPredicted RBP21.23■□□□□ 0.99
EPHB4-207ENST00000489808 CTNNB1P35222 781 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 RESTQ13127 1097 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 CAPSQ13938 189 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 SF3A1Q15459 793 aaKnown RBP21.23■□□□□ 0.99
EPHB4-207ENST00000489808 TWF2Q6IBS0 349 aaKnown RBP21.23■□□□□ 0.99
EPHB4-207ENST00000489808 MICALL1Q8N3F8 863 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 NFKBIZQ9BYH8 718 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 AGPAT5Q9NUQ2 364 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 RNF19AQ9NV58 838 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 COL4A6Q14031 1691 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 LOXHD1Q8IVV2 1947 aa21.23■□□□□ 0.99
EPHB4-207ENST00000489808 HOXA2O43364 376 aa21.22■□□□□ 0.99
EPHB4-207ENST00000489808 STX6O43752 255 aa21.22■□□□□ 0.99
EPHB4-207ENST00000489808 EYA4O95677 639 aa21.22■□□□□ 0.99
EPHB4-207ENST00000489808 PCBP1Q15365 356 aaKnown RBP eCLIP21.22■□□□□ 0.991e-10■■■■■ 32.8
EPHB4-207ENST00000489808 CASD1Q96PB1 797 aa21.22■□□□□ 0.99
EPHB4-207ENST00000489808 PLVAPQ9BX97 442 aa21.22■□□□□ 0.99
EPHB4-207ENST00000489808 TMEM117Q9H0C3 514 aa21.22■□□□□ 0.99
EPHB4-207ENST00000489808 E9PMD0 336 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 INO80B-WBP1J3KQ70 363 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 ZNF623O75123 536 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 SKIP12755 728 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 ATF7P17544 494 aaPredicted RBP21.21■□□□□ 0.99
EPHB4-207ENST00000489808 HYIQ5T013 277 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.21■□□□□ 0.99
EPHB4-207ENST00000489808 RNF169Q8NCN4 708 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 C11orf84Q9BUA3 381 aaPredicted RBP21.21■□□□□ 0.99
EPHB4-207ENST00000489808 FAM105AQ9NUU6 356 aa21.21■□□□□ 0.99
EPHB4-207ENST00000489808 TYW1Q9NV66 732 aaKnown RBP21.21■□□□□ 0.99
EPHB4-207ENST00000489808 MBTD1Q05BQ5 628 aa21.2■□□□□ 0.98
EPHB4-207ENST00000489808 ZRSR1Q15695 479 aaKnown RBP21.2■□□□□ 0.98
EPHB4-207ENST00000489808 NAALADL2Q58DX5 795 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms