RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 TMEM150BA6NC51 233 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 M0R2N6 131 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 SPTLC2O15270 562 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 GRM6O15303 877 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 MGEA5O60502 916 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 PPP6R2O75170 966 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 GPR32O75388 356 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 ME1P48163 572 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 PSMC5P62195 406 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 NPY5RQ15761 445 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 NCAPH2Q6IBW4 605 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 SLC24A5Q71RS6 500 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 ABI1Q8IZP0 508 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 ETNPPLQ8TBG4 499 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 MICAL1Q8TDZ2 1067 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-207ENST00000489692 FAM20AQ96MK3 541 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 RGS18Q9NS28 235 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 CLDND1Q9NY35 253 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
GGPS1-207ENST00000489692 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-207ENST00000489692 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
GGPS1-207ENST00000489692 MYO9BQ13459 2157 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 GBF1Q92538 1859 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 C5orf67F2Z3F1 127 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 H3BQ06 376 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 DKC1O60832 514 aaKnown RBP eCLIP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 FGFR4P22455 802 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 EIF4BP23588 611 aaKnown RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 NR5A1Q13285 461 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 SF3A1Q15459 793 aaKnown RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 PLA2G4FQ68DD2 849 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 PLVAPQ9BX97 442 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 LMAN2LQ9H0V9 348 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-207ENST00000489692 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
GGPS1-207ENST00000489692 FAM237AA0A1B0GTK4 181 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 EML1O00423 815 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CSDE1O75534 798 aaKnown RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 MMP1P03956 469 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 FGFR1P11362 822 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CMA1P23946 247 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 QARSP47897 775 aaKnown RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 GPC3P51654 580 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CAMK4Q16566 473 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 STX1AQ16623 288 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 NLRP4Q96MN2 994 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CCDC43Q96MW1 224 aaKnown RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 MBOAT7Q96N66 472 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 ADAMTS10Q9H324 1103 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 FOXP1Q9H334 677 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 RC3H2Q9HBD1 1191 aaKnown RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-207ENST00000489692 USP25Q9UHP3 1055 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 PLAGL2Q9UPG8 496 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 VCANP13611 3396 aa13.1□□□□□ -0.31
GGPS1-207ENST00000489692 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 C9IYK1 514 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 HOXA2O43364 376 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 ADCY5O95622 1261 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 TPM3P06753 285 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 DARSP14868 501 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 SSTR3P32745 418 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 PPP2R5CQ13362 524 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 DRP2Q13474 957 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
GGPS1-207ENST00000489692 PTPAQ15257 358 aa13.09□□□□□ -0.31
GGPS1-207ENST00000489692 CALCRLQ16602 461 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms