RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ITIH3Q06033 890 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 KCNC3Q14003 757 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 XKR3Q5GH77 459 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
SFXN3-207ENST00000489434 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 SLC39A11Q8N1S5 342 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 HELQQ8TDG4 1101 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
SFXN3-207ENST00000489434 APOL5Q9BWW9 433 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
SFXN3-207ENST00000489434 UNC45AQ9H3U1 944 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 SNX14Q9Y5W7 946 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 MYO10Q9HD67 2058 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 C2orf71A6NGG8 1288 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 CPLX1O14810 134 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 CXCL14O95715 111 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 MTHFRP42898 656 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 BCAR1P56945 870 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 CCT2P78371 535 aaKnown RBP13.41□□□□□ -0.26
SFXN3-207ENST00000489434 RNASELQ05823 741 aaKnown RBP13.41□□□□□ -0.26
SFXN3-207ENST00000489434 SSRP1Q08945 709 aaKnown RBP13.41□□□□□ -0.26
SFXN3-207ENST00000489434 NTRK3Q16288 839 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 UGCGQ16739 394 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 MTERF2Q49AM1 385 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 GLB1LQ6UWU2 654 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
SFXN3-207ENST00000489434 TBCKQ8TEA7 893 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 RIPOR3Q96MK2 946 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 JPH2Q9BR39 696 aaPredicted RBP13.41□□□□□ -0.26
SFXN3-207ENST00000489434 AGXT2Q9BYV1 514 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 ADAM7Q9H2U9 754 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 HCFC2Q9Y5Z7 792 aa13.41□□□□□ -0.26
SFXN3-207ENST00000489434 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 PSMD10O75832 226 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 FGFR4P22455 802 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 SP100P23497 879 aaPredicted RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 PDIA3P30101 505 aaKnown RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 PHKA2P46019 1235 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 RAB27AP51159 221 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 POLGP54098 1239 aaPredicted RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 MTMR3Q13615 1198 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 GIT2Q14161 759 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 TARBP2Q15633 366 aaKnown RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 Q4G0T1 1027 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 IER5LQ5T953 404 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 ZNF410Q86VK4 478 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 UBALD2Q8IYN6 164 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 FAM177A1Q8N128 213 aaPredicted RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 KREMEN2Q8NCW0 462 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 TRAIPQ9BWF2 469 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 NCOA5Q9HCD5 579 aaKnown RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 DZANK1Q9NVP4 752 aa13.4□□□□□ -0.26
SFXN3-207ENST00000489434 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 PIN4Q9Y237 131 aaKnown RBP13.4□□□□□ -0.26
SFXN3-207ENST00000489434 PTPRZ1P23471 2315 aaPredicted RBP13.39□□□□□ -0.27
SFXN3-207ENST00000489434 CYP3A7-CYP3A51PA0A087WV96 503 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.39□□□□□ -0.27
SFXN3-207ENST00000489434 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
SFXN3-207ENST00000489434 CLASP2O75122 1294 aaKnown RBP13.39□□□□□ -0.27
SFXN3-207ENST00000489434 CSDE1O75534 798 aaKnown RBP13.39□□□□□ -0.27
SFXN3-207ENST00000489434 CYP3A7P24462 503 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 NUBP1P53384 320 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 EVCP57679 992 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 ATAT1Q5SQI0 421 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 RHPN2Q8IUC4 686 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 VPS52Q8N1B4 723 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 ASIC4Q96FT7 647 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 STK39Q9UEW8 545 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
SFXN3-207ENST00000489434 A0A087WZ62 844 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 NT5C1B-RDH14C9J2C7 533 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 MAFO75444 373 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-207ENST00000489434 DEXIO95424 95 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 AVPR2P30518 371 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 PSMC5P62195 406 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 DRP2Q13474 957 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 NOMO2Q5JPE7 1267 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 MOXD1Q6UVY6 613 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
SFXN3-207ENST00000489434 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 BLIDQ8IZY5 108 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 TDRD5Q8NAT2 981 aaKnown RBP13.38□□□□□ -0.27
SFXN3-207ENST00000489434 URGCPQ8TCY9 931 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 SLC7A3Q8WY07 619 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 GJA10Q969M2 543 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-207ENST00000489434 SLKQ9H2G2 1235 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-207ENST00000489434 DDX25Q9UHL0 483 aaKnown RBP13.38□□□□□ -0.27
SFXN3-207ENST00000489434 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms