RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TGM1P22735 817 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 ACAP1Q15027 740 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 PPM1JQ5JR12 505 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 ZNF589Q86UQ0 364 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-212ENST00000489378 LRRC43Q8N309 656 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 SLC44A3Q8N4M1 653 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 GIMAP8Q8ND71 665 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-212ENST00000489378 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 PIGSQ96S52 555 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 ZSCAN10Q96SZ4 725 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-212ENST00000489378 FOXQ1Q9C009 403 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 RNF41Q9H4P4 317 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-212ENST00000489378 DCTPP1Q9H773 170 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 ELAC1Q9H777 363 aaKnown RBP10.55□□□□□ -0.72
SSBP1-212ENST00000489378 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 PKD2L1Q9P0L9 805 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 EVPLQ92817 2033 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 SMIM35A0A1B0GVV1 85 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
SSBP1-212ENST00000489378 MS4A1P11836 297 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
SSBP1-212ENST00000489378 DSC3Q14574 896 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 LETM2Q2VYF4 491 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 CLLU1OSQ5K130 101 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 PCNX4Q63HM2 1172 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 MTHFD1LQ6UB35 978 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 NLRX1Q86UT6 975 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 IQCA1Q86XH1 822 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 VPS52Q8N1B4 723 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 NME8Q8N427 588 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 ZBP1Q9H171 429 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 SFXN1Q9H9B4 322 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 PARD6AQ9NPB6 346 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 ARHGEF3Q9NR81 526 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 SH2B1Q9NRF2 756 aaPredicted RBP10.54□□□□□ -0.72
SSBP1-212ENST00000489378 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 USP18Q9UMW8 372 aa10.54□□□□□ -0.72
SSBP1-212ENST00000489378 SMG5Q9UPR3 1016 aaKnown RBP10.54□□□□□ -0.72
SSBP1-212ENST00000489378 ASPMQ8IZT6 3477 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 B4E1Z4 1266 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 SPTLC1O15269 473 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 SRFP11831 508 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 BLOC1S3Q6QNY0 202 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 FAM228AQ86W67 206 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM173Q86WV6 379 aaPredicted RBP10.53□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM87AQ8NBN3 555 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 PJA1Q8NG27 643 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 TMUB1Q9BVT8 246 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 MIA3Q5JRA6 1907 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 COL4A3Q01955 1670 aa10.53□□□□□ -0.72
SSBP1-212ENST00000489378 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-212ENST00000489378 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 GPR182O15218 404 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 ITGB5P18084 799 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 GBP2P32456 591 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-212ENST00000489378 BCAR1P56945 870 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 ZNF528Q3MIS6 628 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 FAM43BQ6ZT52 329 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-212ENST00000489378 KIAA0319LQ8IZA0 1049 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 GPRASP2Q96D09 838 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 ZSWIM5Q9P217 1185 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 IRAK3Q9Y616 596 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 PATJQ8NI35 1801 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 ZZEF1O43149 2961 aa10.52□□□□□ -0.73
SSBP1-212ENST00000489378 HOXA2O43364 376 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 CYTH3O43739 400 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 CTSAP10619 480 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 KLRC1P26715 233 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 CSTF1Q05048 431 aaKnown RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 BMS1Q14692 1282 aaKnown RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 WTAPQ15007 396 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 NONOQ15233 471 aaKnown RBP eCLIP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 PTPN14Q15678 1187 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 KIZQ2M2Z5 673 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 ODR4Q5SWX8 454 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 DCLRE1AQ6PJP8 1040 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 USP17L6PQ6QN14 398 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 RNF169Q8NCN4 708 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 ST13P5Q8NFI4 369 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 ATRIPQ8WXE1 791 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 SECISBP2LQ93073 1101 aaKnown RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 COL26A1Q96A83 441 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 TMEM169Q96HH4 297 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 MYADMQ96S97 322 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 OSMRQ99650 979 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 EPC1Q9H2F5 836 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 AZI2Q9H6S1 392 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 RIOX1Q9H6W3 641 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 SPATA6Q9NWH7 488 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 EPS15L1Q9UBC2 864 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms