RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 FOSP01100 380 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-208ENST00000489247 GH2P01242 217 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 USP17L7P0C7H9 530 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 ATP2B1P20020 1258 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 MSNP26038 577 aaKnown RBP6.23□□□□□ -1.41
ATG4A-208ENST00000489247 CAP2P40123 477 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 KCNJ6P48051 423 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 USP11P51784 963 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 EIF6P56537 245 aaKnown RBP6.23□□□□□ -1.41
ATG4A-208ENST00000489247 ADGRE1Q14246 886 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 MBTPS1Q14703 1052 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 CCDC96Q2M329 555 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 QRICH1Q2TAL8 776 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 HYIQ5T013 277 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 SYDE2Q5VT97 1194 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 FOXR2Q6PJQ5 311 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 HOMER1Q86YM7 354 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 KIAA1524Q8TCG1 905 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 PIBF1Q8WXW3 757 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 JDP2Q8WYK2 163 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-208ENST00000489247 DHX58Q96C10 678 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 TEPSINQ96N21 525 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 MED15Q96RN5 788 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 AMNQ9BXJ7 453 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 TRIM5Q9C035 493 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 KCNF1Q9H3M0 494 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 SH2D4AQ9H788 454 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATG4A-208ENST00000489247 ABCB6Q9NP58 842 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 KCNMB3Q9NPA1 279 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 MYOZ2Q9NPC6 264 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 BRCA1P38398 1863 aaKnown RBP6.23□□□□□ -1.41
ATG4A-208ENST00000489247 FER1L6Q2WGJ9 1857 aa6.23□□□□□ -1.41
ATG4A-208ENST00000489247 A0A087WWV3 80 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 C9orf172C9J069 976 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 MEIS2O14770 477 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 GIPC1O14908 333 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 TBX3O15119 743 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CBFA2T2O43439 604 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 OFD1O75665 1012 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 PTMAP06454 111 aaKnown RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 ASNSP08243 561 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CYP3A4P08684 503 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 ESRRAP11474 423 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 BMP3P12645 472 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CIITAP33076 1130 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 SREBF1P36956 1147 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 UBA7P41226 1012 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 TNNI2P48788 182 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 TERF1P54274 439 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 GSDMDP57764 484 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 FANCCQ00597 558 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 TNFAIP1Q13829 316 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 IKBKEQ14164 716 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CDC37Q16543 378 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 ZNF423Q2M1K9 1284 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 SHROOM1Q2M3G4 852 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 LETM2Q2VYF4 491 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 TMEM119Q4V9L6 283 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 MEI1Q5TIA1 1274 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CDKAL1Q5VV42 579 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 FAM117BQ6P1L5 589 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 APTXQ7Z2E3 356 aaKnown RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 FAM160B2Q86V87 743 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 AGGF1Q8N302 714 aaeCLIP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 COA7Q96BR5 231 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CRELD1Q96HD1 420 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 NACC1Q96RE7 527 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 C7orf25Q9BPX7 421 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 MMTAG2Q9BU76 263 aaKnown RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 MAF1Q9H063 256 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 RANBP17Q9H2T7 1088 aaKnown RBP6.22□□□□□ -1.41
ATG4A-208ENST00000489247 VCPKMTQ9H867 229 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 PSTPIP2Q9H939 334 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 VAT1LQ9HCJ6 419 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 RMND1Q9NWS8 449 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 ZNF112Q9UJU3 913 aa6.22□□□□□ -1.41
ATG4A-208ENST00000489247 CLRN2A0PK11 232 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 LRRC10BA6NIK2 292 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 TCP10L2B9ZVM9 353 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 BIN1O00499 593 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 HYAL3O43820 417 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-208ENST00000489247 SLC37A4O43826 429 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 KLRC4O43908 158 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 CCNT1O60563 726 aaKnown RBP6.21□□□□□ -1.42
ATG4A-208ENST00000489247 RHOBTB3O94955 611 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 NOS3P29474 1203 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 CD68P34810 354 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-208ENST00000489247 SLC16A2P36021 539 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 PPP1R2P41236 205 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 STAT6P42226 847 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 PRELPP51888 382 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 STAT2P52630 851 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 FCGRTP55899 365 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 CALCRLQ16602 461 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 Q4G0T1 1027 aa6.21□□□□□ -1.42
ATG4A-208ENST00000489247 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms