RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 PRDM12Q9H4Q4 367 aa6.58□□□□□ -1.36
CCL20-204ENST00000489160 NTMQ9P121 344 aa6.58□□□□□ -1.36
CCL20-204ENST00000489160 ZNF180Q9UJW8 692 aa6.58□□□□□ -1.36
CCL20-204ENST00000489160 USP18Q9UMW8 372 aa6.58□□□□□ -1.36
CCL20-204ENST00000489160 INVSQ9Y283 1065 aa6.58□□□□□ -1.36
CCL20-204ENST00000489160 A0A0G2JNJ9 132 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 NRP2O60462 931 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 CFPP27918 469 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 ADCY8P40145 1251 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
CCL20-204ENST00000489160 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 TCERG1LQ5VWI1 586 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 CPA6Q8N4T0 437 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 GAB3Q8WWW8 586 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 RTFDC1Q9BY42 306 aaPredicted RBP6.57□□□□□ -1.36
CCL20-204ENST00000489160 HAPLN2Q9GZV7 340 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 L2HGDHQ9H9P8 463 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 Q9UFV3 132 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 IP6K2Q9UHH9 426 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 DPP7Q9UHL4 492 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 CDY2AQ9Y6F7 541 aa6.57□□□□□ -1.36
CCL20-204ENST00000489160 SH3D21A4FU49 640 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 TSPAN6O43657 245 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 KLHL18O94889 574 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 SCGB1D2O95969 90 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 CT47B1P0C2W7 299 aaPredicted RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 OSMP13725 252 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 ZSCAN20P17040 1043 aaPredicted RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 XPAP23025 273 aaPredicted RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 POLD1P28340 1107 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 ODF1Q14990 250 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 MBNL2Q5VZF2 373 aaKnown RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 NOL8Q76FK4 1167 aaKnown RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 C1QL4Q86Z23 238 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 SIAH1Q8IUQ4 282 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 CHPFQ8IZ52 775 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 JADE3Q92613 823 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 DYDC2Q96IM9 177 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 TEKT5Q96M29 485 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 RHOBTB2Q9BYZ6 727 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 IFT122Q9HBG6 1241 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 POLR3BQ9NW08 1133 aaPredicted RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 SAE1Q9UBE0 346 aaPredicted RBP6.56□□□□□ -1.36
CCL20-204ENST00000489160 ANKRD6Q9Y2G4 727 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 GIT1Q9Y2X7 761 aa6.56□□□□□ -1.36
CCL20-204ENST00000489160 ADAMTS20P59510 1910 aa6.55□□□□□ -1.36
CCL20-204ENST00000489160 DDX3XO00571 662 aaKnown RBP eCLIP6.55□□□□□ -1.362e-23■■□□□ 11.7
CCL20-204ENST00000489160 RFPL1O75677 317 aa6.55□□□□□ -1.36
CCL20-204ENST00000489160 CELA3BP08861 270 aa6.55□□□□□ -1.36
CCL20-204ENST00000489160 TOP3AQ13472 1001 aaPredicted RBP6.55□□□□□ -1.36
CCL20-204ENST00000489160 EIF4HQ15056 248 aaKnown RBP6.55□□□□□ -1.36
CCL20-204ENST00000489160 LRRC41Q15345 812 aa6.55□□□□□ -1.36
CCL20-204ENST00000489160 ANO4Q32M45 955 aa6.55□□□□□ -1.36
CCL20-204ENST00000489160 CMTR2Q8IYT2 770 aaKnown RBP6.55□□□□□ -1.36
CCL20-204ENST00000489160 ZNF526Q8TF50 670 aaPredicted RBP6.55□□□□□ -1.36
CCL20-204ENST00000489160 TSPEARQ8WU66 669 aa6.55□□□□□ -1.36
CCL20-204ENST00000489160 JPH3Q8WXH2 748 aaPredicted RBP6.55□□□□□ -1.36
CCL20-204ENST00000489160 SEC24DO94855 1032 aaPredicted RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 VCAM1P19320 739 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 ETV4P43268 484 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 SARSP49591 514 aaKnown RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 KCNQ1P51787 676 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 NRG3P56975 720 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 ANTXR2P58335 489 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 JAG1P78504 1218 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 CDK17Q00537 523 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 MAN2A1Q16706 1144 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 HSP90AB2PQ58FF8 381 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 GAREM2Q75VX8 874 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 GLB1L2Q8IW92 636 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 REXO1L1PQ8IX06 675 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 PAWRQ96IZ0 340 aaKnown RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 YTHDC1Q96MU7 727 aaKnown RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 NUP88Q99567 741 aaPredicted RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 ACE2Q9BYF1 805 aaPredicted RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 TMEM168Q9H0V1 697 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCL20-204ENST00000489160 EVLQ9UI08 416 aaPredicted RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 CDC42EP3Q9UKI2 254 aa6.54□□□□□ -1.36
CCL20-204ENST00000489160 PNMA8BQ9ULN7 279 aaPredicted RBP6.54□□□□□ -1.36
CCL20-204ENST00000489160 A0A0A6YYK5 440 aaPredicted RBP6.53□□□□□ -1.36
CCL20-204ENST00000489160 FFAR3O14843 346 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 HMGCRP04035 888 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 PF4V1P10720 104 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 CCDC181Q5TID7 509 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 Q6ZUG5 572 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 CARFQ8N187 725 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCL20-204ENST00000489160 PPP1R14CQ8TAE6 165 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 FATE1Q969F0 183 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 WDR92Q96MX6 357 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
CCL20-204ENST00000489160 SOX7Q9BT81 388 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms