RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ORC2Q13416 577 aaPredicted RBP27.9■■■□□ 2.06
HMGN1-217ENST00000489072 NBR1Q14596 966 aa27.9■■■□□ 2.06
HMGN1-217ENST00000489072 TIGD5Q53EQ6 642 aa27.9■■■□□ 2.06
HMGN1-217ENST00000489072 IL27Q8NEV9 243 aa27.9■■■□□ 2.06
HMGN1-217ENST00000489072 ALG13Q9NP73 1137 aaKnown RBP27.9■■■□□ 2.06
HMGN1-217ENST00000489072 XPNPEP1Q9NQW7 623 aa27.9■■■□□ 2.06
HMGN1-217ENST00000489072 PLAGL2Q9UPG8 496 aa27.9■■■□□ 2.06
HMGN1-217ENST00000489072 MUC3AQ02505 3323 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 A0A087WWV3 80 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 OR52Z1P0C646 297 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 SPATA31C1P0DKV0 1188 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 SFPQP23246 707 aaKnown RBP eCLIP27.89■■■□□ 2.06
HMGN1-217ENST00000489072 PSPC1Q8WXF1 523 aaKnown RBP27.89■■■□□ 2.06
HMGN1-217ENST00000489072 P2RX5Q93086 422 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 LMAN2LQ9H0V9 348 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 ANKEF1Q9NU02 776 aa27.89■■■□□ 2.06
HMGN1-217ENST00000489072 ITGB1P05556 798 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 BMP1P13497 986 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 TECP42680 631 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 TRAPPC10P48553 1259 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 TOB1P50616 345 aaPredicted RBP27.88■■■□□ 2.05
HMGN1-217ENST00000489072 LAMTOR4Q0VGL1 99 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 TCEAL5Q5H9L2 206 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 C4orf32Q8N8J7 132 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 KLHL23Q8NBE8 558 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 PIGOQ8TEQ8 1089 aa27.88■■■□□ 2.05
HMGN1-217ENST00000489072 INO80BQ9C086 356 aaPredicted RBP27.88■■■□□ 2.05
HMGN1-217ENST00000489072 A0A0U1RQF3 1178 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 GAS2O43903 313 aaKnown RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 SRGAP2CP0DJJ0 459 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 ATF7P17544 494 aaPredicted RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 DNAJB1P25685 340 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 CAMK1Q14012 370 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 AAK1Q2M2I8 961 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 NAALADL2Q58DX5 795 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 ZNF598Q86UK7 904 aaKnown RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 CASD1Q96PB1 797 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 MTRQ99707 1265 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 TMEM117Q9H0C3 514 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 NSUN3Q9H649 340 aaKnown RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 CWH43Q9H720 699 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 UBE2ZQ9H832 354 aaPredicted RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 MINDY3Q9H8M7 445 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 CHST12Q9NRB3 414 aa27.87■■■□□ 2.05
HMGN1-217ENST00000489072 TYW1Q9NV66 732 aaKnown RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 NOL7Q9UMY1 257 aaKnown RBP27.87■■■□□ 2.05
HMGN1-217ENST00000489072 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.86■■■□□ 2.05
HMGN1-217ENST00000489072 MED24O75448 989 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 CSPG5O95196 566 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 RARRES1P49788 294 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 CATSPER4Q7RTX7 472 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 FERMT3Q86UX7 667 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 CATSPER3Q86XQ3 398 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 RNF169Q8NCN4 708 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 SPPL3Q8TCT6 385 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 ADAMTS19Q8TE59 1207 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 TCP11Q8WWU5 503 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 DACT1Q9NYF0 836 aa27.86■■■□□ 2.05
HMGN1-217ENST00000489072 PIN4Q9Y237 131 aaKnown RBP27.86■■■□□ 2.05
HMGN1-217ENST00000489072 MCM2P49736 904 aa27.85■■■□□ 2.05
HMGN1-217ENST00000489072 CLLU1OSQ5K130 101 aa27.85■■■□□ 2.05
HMGN1-217ENST00000489072 SPOUT1Q5T280 376 aaKnown RBP27.85■■■□□ 2.05
HMGN1-217ENST00000489072 LRRC55Q6ZSA7 311 aa27.85■■■□□ 2.05
HMGN1-217ENST00000489072 TUFT1Q9NNX1 390 aa27.85■■■□□ 2.05
HMGN1-217ENST00000489072 KIF3AQ9Y496 699 aa27.85■■■□□ 2.05
HMGN1-217ENST00000489072 HOXA2O43364 376 aa27.84■■■□□ 2.05
HMGN1-217ENST00000489072 GJB2P29033 226 aa27.84■■■□□ 2.05
HMGN1-217ENST00000489072 SRGAP1Q7Z6B7 1085 aa27.84■■■□□ 2.05
HMGN1-217ENST00000489072 RNF149Q8NC42 400 aa27.84■■■□□ 2.05
HMGN1-217ENST00000489072 POLR3CQ9BUI4 534 aaPredicted RBP27.84■■■□□ 2.05
HMGN1-217ENST00000489072 TRAIPQ9BWF2 469 aa27.84■■■□□ 2.05
HMGN1-217ENST00000489072 PCDHB6Q9Y5E3 794 aa27.84■■■□□ 2.05
HMGN1-217ENST00000489072 ASAP2O43150 1006 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 DGAT1O75907 488 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 EOMESO95936 686 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 XRCC6P12956 609 aaKnown RBP eCLIP27.83■■■□□ 2.05
HMGN1-217ENST00000489072 PHKA2P46019 1235 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 TWF2Q6IBS0 349 aaKnown RBP27.83■■■□□ 2.05
HMGN1-217ENST00000489072 COLGALT1Q8NBJ5 622 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 ASAP3Q8TDY4 903 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 AGPAT5Q9NUQ2 364 aa27.83■■■□□ 2.05
HMGN1-217ENST00000489072 COL19A1Q14993 1142 aa27.82■■■□□ 2.04
HMGN1-217ENST00000489072 POTEGQ6S5H5 508 aa27.82■■■□□ 2.04
HMGN1-217ENST00000489072 HELQQ8TDG4 1101 aa27.82■■■□□ 2.04
HMGN1-217ENST00000489072 POF1BQ8WVV4 589 aa27.82■■■□□ 2.04
HMGN1-217ENST00000489072 CCDC43Q96MW1 224 aaKnown RBP27.82■■■□□ 2.04
HMGN1-217ENST00000489072 NECAB3Q96P71 396 aaPredicted RBP27.82■■■□□ 2.04
HMGN1-217ENST00000489072 AAASQ9NRG9 546 aa27.82■■■□□ 2.04
HMGN1-217ENST00000489072 PCDHB12Q9Y5F1 795 aa27.82■■■□□ 2.04
HMGN1-217ENST00000489072 USO1O60763 962 aaKnown RBP27.81■■■□□ 2.04
HMGN1-217ENST00000489072 KCNA5P22460 613 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 RPA1P27694 616 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 IRS1P35568 1242 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 ARL2P36404 184 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 FXR2P51116 673 aaKnown RBP eCLIP27.81■■■□□ 2.04
HMGN1-217ENST00000489072 PTGDRQ13258 359 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 MXD4Q14582 209 aaPredicted RBP27.81■■■□□ 2.04
HMGN1-217ENST00000489072 MCTP1Q6DN14 999 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 ABI1Q8IZP0 508 aa27.81■■■□□ 2.04
HMGN1-217ENST00000489072 UHRF1Q96T88 793 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms