RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 ABCB5Q2M3G0 1257 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 GPR155Q7Z3F1 870 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 RALYLQ86SE5 291 aaKnown RBP7.25□□□□□ -1.25
USP48-209ENST00000487880 C1orf162Q8NEQ5 155 aaPredicted RBP7.25□□□□□ -1.25
USP48-209ENST00000487880 OR14C36Q8NHC7 312 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 WDR92Q96MX6 357 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 FDXACB1Q9BRP7 624 aaPredicted RBP7.25□□□□□ -1.25
USP48-209ENST00000487880 OSBPL6Q9BZF3 934 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 KIAA1683Q9H0B3 1180 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 CDY2AQ9Y6F7 541 aa7.25□□□□□ -1.25
USP48-209ENST00000487880 RBP3P10745 1247 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 MTNR1BP49286 362 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 MRE11P49959 708 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 LGALS4P56470 323 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
USP48-209ENST00000487880 PPARAQ07869 468 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 PCOLCEQ15113 449 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 PLEKHG6Q3KR16 790 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 AGBL4Q5VU57 503 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 KLHDC10Q6PID8 442 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 FAM124AQ86V42 546 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 KBTBD2Q8IY47 623 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 TSPEARQ8WU66 669 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 GAB3Q8WWW8 586 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 ZNF277Q9NRM2 450 aaPredicted RBP7.24□□□□□ -1.25
USP48-209ENST00000487880 EVLQ9UI08 416 aaPredicted RBP7.24□□□□□ -1.25
USP48-209ENST00000487880 SYNPO2Q9UMS6 1093 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 EDARQ9UNE0 448 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 TNKSO95271 1327 aa7.24□□□□□ -1.25
USP48-209ENST00000487880 SHTN1A0MZ66 631 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 CFBP00751 764 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 MTHFD2P13995 350 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 SESN2P58004 480 aaPredicted RBP7.23□□□□□ -1.25
USP48-209ENST00000487880 MUM1Q2TAK8 710 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 BORAQ6PGQ7 559 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 GAREM2Q75VX8 874 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 RTKN2Q8IZC4 609 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 GFM2Q969S9 779 aaKnown RBP7.23□□□□□ -1.25
USP48-209ENST00000487880 FUBP3Q96I24 572 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP48-209ENST00000487880 FAXDC2Q96IV6 333 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 SLC13A1Q9BZW2 595 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 QRSL1Q9H0R6 528 aaKnown RBP7.23□□□□□ -1.25
USP48-209ENST00000487880 XYLT2Q9H1B5 865 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 DNAJC28Q9NX36 388 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 DNAI1Q9UI46 699 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 USP18Q9UMW8 372 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 ZDHHC9Q9Y397 364 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 SPEF1Q9Y4P9 236 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 CTDP1Q9Y5B0 961 aaPredicted RBP7.23□□□□□ -1.25
USP48-209ENST00000487880 SLC4A7Q9Y6M7 1214 aa7.23□□□□□ -1.25
USP48-209ENST00000487880 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
USP48-209ENST00000487880 NRP2O60462 931 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 MT-CO1P00395 513 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 MYBL2P10244 700 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 BMP7P18075 431 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 AGXTP21549 392 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 MEOX1P50221 254 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 NFYCQ13952 458 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 SPIDRQ14159 915 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 ZMAT1Q5H9K5 638 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 TOR2AQ5JU69 321 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 CLEC14AQ86T13 490 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 FEZF2Q8TBJ5 459 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 AUTS2Q8WXX7 1259 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 SSH1Q8WYL5 1049 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 SMAD5Q99717 465 aaKnown RBP7.22□□□□□ -1.25
USP48-209ENST00000487880 OR10A2Q9H208 303 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 DPP7Q9UHL4 492 aa7.22□□□□□ -1.25
USP48-209ENST00000487880 SASH1O94885 1247 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 HNRNPLP14866 589 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP48-209ENST00000487880 RRADP55042 308 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 HGFACQ04756 655 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 TBR1Q16650 682 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 FRMD5Q7Z6J6 570 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 LGI4Q8N135 537 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 CEP89Q96ST8 783 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 PARD6AQ9NPB6 346 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 USP40Q9NVE5 1235 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 DUSP10Q9Y6W6 482 aa7.21□□□□□ -1.26
USP48-209ENST00000487880 PCDHGA12O60330 932 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 ALDH1L1O75891 902 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 CNOT4O95628 575 aaKnown RBP7.2□□□□□ -1.26
USP48-209ENST00000487880 GAAP10253 952 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 NEK2P51955 445 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 ADAM15Q13444 863 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 MAN2A1Q16706 1144 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 PGM2L1Q6PCE3 622 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 PLEKHH3Q7Z736 793 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 GLB1L2Q8IW92 636 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 UNC5BQ8IZJ1 945 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 LPPQ93052 612 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 CHMP4CQ96CF2 233 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 IFT122Q9HBG6 1241 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 PCDHGA9Q9Y5G4 932 aaKnown RBP7.2□□□□□ -1.26
USP48-209ENST00000487880 PCDHGA8Q9Y5G5 932 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 PCDHGA7Q9Y5G6 932 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 PCDHGA6Q9Y5G7 932 aa7.2□□□□□ -1.26
USP48-209ENST00000487880 PCDHGA3Q9Y5H0 932 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms