RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 RWDD3Q9Y3V2 267 aa21.82■■□□□ 1.08
SNX5-213ENST00000486039 PCDHB6Q9Y5E3 794 aa21.82■■□□□ 1.08
SNX5-213ENST00000486039 COL4A3BPQ9Y5P4 624 aa21.82■■□□□ 1.08
SNX5-213ENST00000486039 MED24O75448 989 aa21.81■■□□□ 1.08
SNX5-213ENST00000486039 RARRES1P49788 294 aa21.81■■□□□ 1.08
SNX5-213ENST00000486039 PTPROQ16827 1216 aa21.81■■□□□ 1.08
SNX5-213ENST00000486039 PIGOQ8TEQ8 1089 aa21.81■■□□□ 1.08
SNX5-213ENST00000486039 PSPC1Q8WXF1 523 aaKnown RBP21.81■■□□□ 1.08
SNX5-213ENST00000486039 MRPL38Q96DV4 380 aaKnown RBP21.81■■□□□ 1.08
SNX5-213ENST00000486039 MTRQ99707 1265 aa21.81■■□□□ 1.08
SNX5-213ENST00000486039 NCOR1O75376 2440 aa21.81■■□□□ 1.08
SNX5-213ENST00000486039 BDP1A6H8Y1 2624 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 RALGAPA2Q2PPJ7 1873 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 NLRC5Q86WI3 1866 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.8■■□□□ 1.08
SNX5-213ENST00000486039 GAS2O43903 313 aaKnown RBP21.8■■□□□ 1.08
SNX5-213ENST00000486039 FGFR1P11362 822 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 LAMTOR4Q0VGL1 99 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 FERMT3Q86UX7 667 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 TCP11Q8WWU5 503 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 INO80BQ9C086 356 aaPredicted RBP21.8■■□□□ 1.08
SNX5-213ENST00000486039 UBE2ZQ9H832 354 aaPredicted RBP21.8■■□□□ 1.08
SNX5-213ENST00000486039 ATP6V0A4Q9HBG4 840 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 TUFT1Q9NNX1 390 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 RNF19AQ9NV58 838 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 RNF216Q9NWF9 866 aaPredicted RBP21.8■■□□□ 1.08
SNX5-213ENST00000486039 SMC3Q9UQE7 1217 aa21.8■■□□□ 1.08
SNX5-213ENST00000486039 TBKBP1A7MCY6 615 aa21.79■■□□□ 1.08
SNX5-213ENST00000486039 SRGAP2CP0DJJ0 459 aa21.79■■□□□ 1.08
SNX5-213ENST00000486039 XRCC6P12956 609 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNX5-213ENST00000486039 SFPQP23246 707 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNX5-213ENST00000486039 MCTP1Q6DN14 999 aa21.79■■□□□ 1.08
SNX5-213ENST00000486039 ECHDC2Q86YB7 292 aa21.79■■□□□ 1.08
SNX5-213ENST00000486039 C11orf84Q9BUA3 381 aaPredicted RBP21.79■■□□□ 1.08
SNX5-213ENST00000486039 POLR3CQ9BUI4 534 aaPredicted RBP21.79■■□□□ 1.08
SNX5-213ENST00000486039 PLVAPQ9BX97 442 aa21.79■■□□□ 1.08
SNX5-213ENST00000486039 CHST12Q9NRB3 414 aa21.79■■□□□ 1.08
SNX5-213ENST00000486039 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.79■■□□□ 1.08
SNX5-213ENST00000486039 A0A0U1RQF3 1178 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 GRM6O15303 877 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 DGAT1O75907 488 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 FXR2P51116 673 aaKnown RBP eCLIP21.78■■□□□ 1.087e-8■■□□□ 11.9
SNX5-213ENST00000486039 PTGDRQ13258 359 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 ZNF598Q86UK7 904 aaKnown RBP21.78■■□□□ 1.08
SNX5-213ENST00000486039 MINDY3Q9H8M7 445 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.78■■□□□ 1.08
SNX5-213ENST00000486039 HCSTQ9UBK5 93 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 ARID2Q68CP9 1835 aa21.78■■□□□ 1.08
SNX5-213ENST00000486039 H3BQV1 296 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 ASAP2O43150 1006 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 ATF7P17544 494 aaPredicted RBP21.77■■□□□ 1.08
SNX5-213ENST00000486039 RPA1P27694 616 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 CUL4AQ13619 759 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 TIGD5Q53EQ6 642 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 CATSPER4Q7RTX7 472 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 SRGAP1Q7Z6B7 1085 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 RNF149Q8NC42 400 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 ERMNQ8TAM6 284 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 P2RX5Q93086 422 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 CASD1Q96PB1 797 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 DACT1Q9NYF0 836 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 PLAGL2Q9UPG8 496 aa21.77■■□□□ 1.08
SNX5-213ENST00000486039 PIN4Q9Y237 131 aaKnown RBP21.77■■□□□ 1.08
SNX5-213ENST00000486039 COL9A1P20849 921 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 ARL2P36404 184 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 ECM1Q16610 540 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 LEXMQ3ZCV2 418 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 POTEGQ6S5H5 508 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 ASAP3Q8TDY4 903 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 CCDC43Q96MW1 224 aaKnown RBP21.76■■□□□ 1.07
SNX5-213ENST00000486039 NACC1Q96RE7 527 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 TRAIPQ9BWF2 469 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 TMEM117Q9H0C3 514 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 ALG13Q9NP73 1137 aaKnown RBP21.76■■□□□ 1.07
SNX5-213ENST00000486039 TYW1Q9NV66 732 aaKnown RBP21.76■■□□□ 1.07
SNX5-213ENST00000486039 DBR1Q9UK59 544 aaKnown RBP21.76■■□□□ 1.07
SNX5-213ENST00000486039 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
SNX5-213ENST00000486039 FNDC1Q4ZHG4 1894 aaPredicted RBP21.75■■□□□ 1.07
SNX5-213ENST00000486039 HOXA2O43364 376 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 USO1O60763 962 aaKnown RBP21.75■■□□□ 1.07
SNX5-213ENST00000486039 ITGB1P05556 798 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 KCNA5P22460 613 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 CAMK1Q14012 370 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 PDIA5Q14554 519 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 MXD4Q14582 209 aaPredicted RBP21.75■■□□□ 1.07
SNX5-213ENST00000486039 IL17AQ16552 155 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 NAALADL2Q58DX5 795 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 RILPL1Q5EBL4 403 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 CLLU1OSQ5K130 101 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 LARP1BQ659C4 914 aaKnown RBP21.75■■□□□ 1.07
SNX5-213ENST00000486039 LRRC55Q6ZSA7 311 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 IGSF22Q8N9C0 903 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 KLHL23Q8NBE8 558 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 RNF169Q8NCN4 708 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 LMAN2LQ9H0V9 348 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 CWH43Q9H720 699 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 AGPAT5Q9NUQ2 364 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 LRWD1Q9UFC0 647 aa21.75■■□□□ 1.07
SNX5-213ENST00000486039 KIAA1671Q9BY89 1806 aa21.74■■□□□ 1.07
SNX5-213ENST00000486039 EOMESO95936 686 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms