RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 CFPP27918 469 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 RAD52P43351 418 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 MECP2P51608 486 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 KPNA1P52294 538 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 KRT83P78385 493 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 TMF1P82094 1093 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 PAK1Q13153 545 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 WTAPQ15007 396 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 PDCD2Q16342 344 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 ABCB5Q2M3G0 1257 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 SKOR2Q2VWA4 1001 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 ARMC4Q5T2S8 1044 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 SFRP5Q5T4F7 317 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 UTP14CQ5TAP6 766 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 DENND5AQ6IQ26 1287 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 FAM180BQ6P0A1 224 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 LETMD1Q6P1Q0 360 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 TMCO3Q6UWJ1 677 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 EPM2AIP1Q7L775 607 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 THAP5Q7Z6K1 395 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 SDCCAG8Q86SQ7 713 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 MTDHQ86UE4 582 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 MYLK4Q86YV6 388 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 ZC3H7AQ8IWR0 971 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 FAM186BQ8IYM0 893 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 FAM43AQ8N2R8 423 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 MFSD4AQ8N468 514 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 IGSF22Q8N9C0 903 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 CCDC191Q8NCU4 936 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 ERCC4Q92889 916 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 GJA10Q969M2 543 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 TIFAQ96CG3 184 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 BORCS6Q96GS4 357 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 LIN37Q96GY3 246 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 ZMAT2Q96NC0 199 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 GSDMAQ96QA5 445 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 NELL2Q99435 816 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 ALG1Q9BT22 464 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 PRDM14Q9GZV8 571 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 CARS2Q9HA77 564 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 DDX21Q9NR30 783 aaKnown RBP eCLIP5.11□□□□□ -1.59
RTN4-213ENST00000485749 ARGLU1Q9NWB6 273 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 HOXC10Q9NYD6 342 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 FAM50BQ9Y247 325 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 RRP7AQ9Y3A4 280 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 ST14Q9Y5Y6 855 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 SYNDIG1LA6NDD5 238 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 GOLGA6L3A6NEY3 463 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 FYB1O15117 783 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 SIGLEC6O43699 453 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 PLOD3O60568 738 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 TIPRLO75663 272 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 INMTO95050 263 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 ZNF853P0CG23 659 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 IL4RP24394 825 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 AKAP5P24588 427 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 STIP1P31948 543 aaKnown RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 LTBRP36941 435 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 IARSP41252 1262 aaKnown RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 RXRGP48443 463 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 GJA9P57773 515 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 CCT2P78371 535 aaKnown RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 SCRN1Q12765 414 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 MOGSQ13724 837 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 PPP2R5DQ14738 602 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 FAM47CQ5HY64 1035 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 LILRA6Q6PI73 481 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 KCNT2Q6UVM3 1135 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 LBX2Q6XYB7 198 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 PPIL6Q8IXY8 311 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 CMTR2Q8IYT2 770 aaKnown RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 CEP57L1Q8IYX8 460 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 EFHBQ8N7U6 833 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 SPATA5Q8NB90 893 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 OR8H1Q8NGG4 311 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 PCDH19Q8TAB3 1148 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 NPLOC4Q8TAT6 608 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 USP6NLQ92738 828 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 HSPBAP1Q96EW2 488 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 RMDN2Q96LZ7 410 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 PPM1MQ96MI6 270 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 ZNF396Q96N95 335 aaPredicted RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 AGAP3Q96P47 875 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 MIPEPQ99797 713 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 PHF20Q9BVI0 1012 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 RWDD1Q9H446 243 aaPredicted RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 RPAP3Q9H6T3 665 aaPredicted RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 EPB41L4AQ9HCS5 686 aaPredicted RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 C1orf112Q9NSG2 853 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 TBC1D22BQ9NU19 505 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 CTNNA3Q9UI47 895 aa5.1□□□□□ -1.59
RTN4-213ENST00000485749 GPR55Q9Y2T6 319 aaPredicted RBP5.1□□□□□ -1.59
RTN4-213ENST00000485749 SCRIBQ14160 1630 aa5.09□□□□□ -1.59
RTN4-213ENST00000485749 GPRASP1Q5JY77 1395 aa5.09□□□□□ -1.59
RTN4-213ENST00000485749 TNIKQ9UKE5 1360 aa5.09□□□□□ -1.59
RTN4-213ENST00000485749 TMCO5BA8MYB1 307 aa5.09□□□□□ -1.59
RTN4-213ENST00000485749 APAF1O14727 1248 aa5.09□□□□□ -1.59
RTN4-213ENST00000485749 MEFVO15553 781 aaPredicted RBP5.09□□□□□ -1.59
RTN4-213ENST00000485749 AKR1B10O60218 316 aa5.09□□□□□ -1.59
RTN4-213ENST00000485749 E2F6O75461 281 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms