RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 RNF149Q8NC42 400 aa13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PLIN2Q99541 437 aa13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CFAP45Q9UL16 551 aa13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 COL4A6Q14031 1691 aa13.02□□□□□ -0.33
CDK5RAP2-217ENST00000484546 LRRIQ4A6NIV6 560 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 E9PMD0 336 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 EYA4O95677 639 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 GRIN2CQ14957 1233 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PPP2R5AQ15172 486 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PTPAQ15257 358 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ECM1Q16610 540 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ZBTB8OSQ8IWT0 167 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 RAD9AQ99638 391 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ADAM2Q99965 735 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 DACT1Q9NYF0 836 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 INSL6Q9Y581 213 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PCDHB7Q9Y5E2 793 aa13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SRPRBQ9Y5M8 271 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CHD9Q3L8U1 2897 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 COL4A4P53420 1690 aaPredicted RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 LCHNA4D1U4 455 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ENPP3O14638 875 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SPTLC2O15270 562 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 YEATS4O95619 227 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CYP11B2P19099 503 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 FGFR4P22455 802 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PKP1Q13835 747 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 DEPTORQ8TB45 409 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 MYLIPQ8WY64 445 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 KIFAP3Q92845 792 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TOP1MTQ969P6 601 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PIN4Q9Y237 131 aaKnown RBP13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PPP6R2O75170 966 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CSDE1O75534 798 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ARL2P36404 184 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SARSP49591 514 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 HTRA4P83105 476 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TAP1Q03518 808 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 GRIN1Q05586 938 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 GRB10Q13322 594 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 HYIQ5T013 277 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SLC24A5Q71RS6 500 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 LINC00301Q8NCQ3 95 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ASAP3Q8TDY4 903 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SYMPKQ92797 1274 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 C2orf40Q9H1Z8 148 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CHST12Q9NRB3 414 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 RGS18Q9NS28 235 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TTC3P53804 2025 aa12.99□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 MGEA5O60502 916 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 BRD1O95696 1058 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 LIG1P18858 919 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PLCG1P19174 1290 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 GLRA2P23416 452 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ME1P48163 572 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 KRT85P78386 507 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 NUCB2P80303 420 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 CAPSQ13938 189 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 PCBP1Q15365 356 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 RRAGBQ5VZM2 374 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 SPRED2Q7Z698 418 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 RTN4RL1Q86UN2 441 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
CDK5RAP2-217ENST00000484546 RNF169Q8NCN4 708 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms