RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TRAPPC10P48553 1259 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 JAK3P52333 1124 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 KIZQ2M2Z5 673 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 LETM2Q2VYF4 491 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 PDE12Q6L8Q7 609 aaKnown RBP11.23□□□□□ -0.61
CPSF4-213ENST00000484112 SWSAP1Q6NVH7 229 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 ANKRD54Q6NXT1 300 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 PDXDC2PQ6P474 469 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 ABHD15Q6UXT9 468 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 FAM43BQ6ZT52 329 aaPredicted RBP11.23□□□□□ -0.61
CPSF4-213ENST00000484112 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 METTL13Q8N6R0 699 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 MRPS27Q92552 414 aaKnown RBP11.23□□□□□ -0.61
CPSF4-213ENST00000484112 INTS4Q96HW7 963 aaKnown RBP11.23□□□□□ -0.61
CPSF4-213ENST00000484112 TEKT3Q9BXF9 490 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 S1PR5Q9H228 398 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 CWH43Q9H720 699 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 ZNF302Q9NR11 478 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 PLXNA4Q9HCM2 1894 aa11.23□□□□□ -0.61
CPSF4-213ENST00000484112 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 HIDE1A8MVS5 230 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 FSCN2O14926 492 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CCNT1O60563 726 aaKnown RBP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 PSMD10O75832 226 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 TDP2O95551 362 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CCNE2O96020 404 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 PDGFBP01127 241 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 VTNP04004 478 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 PBX3P40426 434 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 NR5A1Q13285 461 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CUL4AQ13619 759 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 ZNF484Q5JVG2 852 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 LRCH2Q5VUJ6 765 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 SYCE2Q6PIF2 218 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 TMC7Q7Z402 723 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 FAM228AQ86W67 206 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CCDC60Q8IWA6 550 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 RNF169Q8NCN4 708 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 SNX21Q969T3 373 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CDH22Q9UJ99 828 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 CEP131Q9UPN4 1083 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 SMC3Q9UQE7 1217 aa11.22□□□□□ -0.61
CPSF4-213ENST00000484112 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-213ENST00000484112 LOXHD1Q8IVV2 1947 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 COL1A2P08123 1366 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.61
CPSF4-213ENST00000484112 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
CPSF4-213ENST00000484112 PDCP20941 246 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
CPSF4-213ENST00000484112 PLCB3Q01970 1234 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 KRT17Q04695 432 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 PPP2R5CQ13362 524 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 GNL2Q13823 731 aaKnown RBP11.21□□□□□ -0.61
CPSF4-213ENST00000484112 KCNT2Q6UVM3 1135 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 B3GNT9Q6UX72 402 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 LRRC55Q6ZSA7 311 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 NOSTRINQ8IVI9 506 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 ABI1Q8IZP0 508 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 KREMEN2Q8NCW0 462 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
CPSF4-213ENST00000484112 FAM167AQ96KS9 214 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 RIPOR3Q96MK2 946 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 ZNF558Q96NG5 402 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 TMEM117Q9H0C3 514 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 IRF2BPLQ9H1B7 796 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 DISC1Q9NRI5 854 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.61
CPSF4-213ENST00000484112 LZTS1Q9Y250 596 aa11.21□□□□□ -0.61
CPSF4-213ENST00000484112 C22orf31O95567 290 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 ZSCAN20P17040 1043 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-213ENST00000484112 ATP4AP20648 1035 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 GJB2P29033 226 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 FAM189BP81408 668 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 KCNC3Q14003 757 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 CASP10Q92851 521 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 ZNF668Q96K58 619 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-213ENST00000484112 CASD1Q96PB1 797 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 ELAC1Q9H777 363 aaKnown RBP11.2□□□□□ -0.62
CPSF4-213ENST00000484112 NGRNQ9NPE2 291 aaKnown RBP11.2□□□□□ -0.62
CPSF4-213ENST00000484112 AKT3Q9Y243 479 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 SAMM50Q9Y512 469 aa11.2□□□□□ -0.62
CPSF4-213ENST00000484112 ZBTB42B2RXF5 422 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 H3BQV1 296 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-213ENST00000484112 HOXA2O43364 376 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 SLC37A4O43826 429 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 MARCH6O60337 910 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 NEMFO60524 1076 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms