RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	PHKA2	P46019	1235 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	REST	Q13127	1097 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	SF3A1	Q15459	793 aa	Known RBP	13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	ECM1	Q16610	540 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	PADI6	Q6TGC4	694 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	FIBCD1	Q8N539	461 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	RNF149	Q8NC42	400 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	NFKBIZ	Q9BYH8	718 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	RC3H2	Q9HBD1	1191 aa	Known RBP	13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	DDX19A	Q9NUU7	478 aa	Known RBP	13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	TMEM161A	Q9NX61	479 aa		13.74	□□□□□ -0.21
MRPL55-229	ENST00000483159	COL4A6	Q14031	1691 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	ADGRA3	Q8IWK6	1321 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	CHD7	Q9P2D1	2997 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159		A0A0U1RQF3	1178 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	USO1	O60763	962 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	CSDE1	O75534	798 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	EOMES	O95936	686 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	SKI	P12755	728 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	LONP1	P36776	959 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	PTEN	P60484	403 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	HYI	Q5T013	277 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	CATSPER4	Q7RTX7	472 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	CMTR2	Q8IYT2	770 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	ARNTL2	Q8WYA1	636 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	MMTAG2	Q9BU76	263 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	NT5C3A	Q9H0P0	336 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	RWDD3	Q9Y3V2	267 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	SI	P14410	1827 aa		13.73	□□□□□ -0.21
MRPL55-229	ENST00000483159	WDR81	Q562E7	1941 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	PP2D1	A8MPX8	630 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	HOXA2	O43364	376 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	EYA4	O95677	639 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	FGFR4	P22455	802 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	GLRA2	P23416	452 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	CDC25A	P30304	524 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	NCBP1	Q09161	790 aa	Known RBP	13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	BTG3	Q14201	252 aa	Predicted RBP	13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	ADGRE1	Q14246	886 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	RSPH1	Q8WYR4	309 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	CLP1	Q92989	425 aa	Known RBP	13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	BHMT2	Q9H2M3	363 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	CERS4	Q9HA82	394 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	LMCD1	Q9NZU5	365 aa		13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.72	□□□□□ -0.21
MRPL55-229	ENST00000483159	MICAL3	Q7RTP6	2002 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	C5orf67	F2Z3F1	127 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	ZNF623	O75123	536 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	RB1	P06400	928 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	AXL	P30530	894 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	UBA7	P41226	1012 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	CAPS	Q13938	189 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	PTPA	Q15257	358 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	EPC2	Q52LR7	807 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	FAM102B	Q5T8I3	360 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	ECHDC2	Q86YB7	292 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	TMEM192	Q8IY95	271 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	MAFA	Q8NHW3	353 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	ASAP3	Q8TDY4	903 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	KIFAP3	Q92845	792 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	C17orf80	Q9BSJ5	609 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	MINDY3	Q9H8M7	445 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	AGPAT5	Q9NUQ2	364 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	DAXX	Q9UER7	740 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	PIN4	Q9Y237	131 aa	Known RBP	13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	CLIC4	Q9Y696	253 aa		13.71	□□□□□ -0.21
MRPL55-229	ENST00000483159	EVPL	Q92817	2033 aa		13.71	□□□□□ -0.22
MRPL55-229	ENST00000483159	EPOP	A6NHQ4	379 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159		E9PMD0	336 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	GTPBP6	O43824	516 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	LINC00271	P0C7V0	271 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	IGFBP4	P22692	258 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	HOXA11	P31270	313 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	BMPR1A	P36894	532 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	RAB27A	P51159	221 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	GRB10	Q13322	594 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	PPP2R5A	Q15172	486 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	TWF2	Q6IBS0	349 aa	Known RBP	13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	CABP7	Q86V35	215 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	FBXO22	Q8NEZ5	403 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	CDK5RAP3	Q96JB5	506 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	TIPIN	Q9BVW5	301 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	PLVAP	Q9BX97	442 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	GPRC5C	Q9NQ84	441 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	KCND2	Q9NZV8	630 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	SRPRB	Q9Y5M8	271 aa	Known RBP	13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	TRANK1	O15050	2925 aa		13.7	□□□□□ -0.22
MRPL55-229	ENST00000483159	PTPRS	Q13332	1948 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159		H3BNC9	293 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	INO80B-WBP1	J3KQ70	363 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	RFXAP	O00287	272 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	LPXN	O60711	386 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	ERLIN2	O94905	339 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	NAMPT	P43490	491 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	MBTD1	Q05BQ5	628 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	SLC39A14	Q15043	492 aa		13.69	□□□□□ -0.22
MRPL55-229	ENST00000483159	TMEM119	Q4V9L6	283 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms