RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 PCDHGC5Q9Y5F6 944 aa12.72□□□□□ -0.37
RAPGEF1-207ENST00000481260 VPS37CA5D8V6 355 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 TBKBP1A7MCY6 615 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 ARL2P36404 184 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 CCT6AP40227 531 aaKnown RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 PBX3P40426 434 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 DNM2P50570 870 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 CAPSQ13938 189 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 SLC24A5Q71RS6 500 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 OTUD6AQ7L8S5 288 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 ZNF598Q86UK7 904 aaKnown RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 ECHDC2Q86YB7 292 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 RNF149Q8NC42 400 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 NEK9Q8TD19 979 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 PLIN2Q99541 437 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 MTRQ99707 1265 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 POLR3CQ9BUI4 534 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 GCOM2Q9BZD3 368 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 POLR3FQ9H1D9 316 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 TUFT1Q9NNX1 390 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 PCDHB7Q9Y5E2 793 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 TTC28Q96AY4 2481 aa12.71□□□□□ -0.37
RAPGEF1-207ENST00000481260 C5orf42Q9H799 3197 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 KIAA1671Q9BY89 1806 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 E9PMD0 336 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 B4GALT5O43286 388 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 B4GALT3O60512 393 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 EDN1P05305 212 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 SYT1P21579 422 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 RPA1P27694 616 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 HOXA11P31270 313 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 BMPR1AP36894 532 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 AFF1P51825 1210 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 ATP2C1P98194 919 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 RESTQ13127 1097 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 ORC2Q13416 577 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 GPM6BQ13491 265 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 CAMK1Q14012 370 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 ZNF410Q86VK4 478 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 CDR2LQ86X02 465 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 CPB2Q96IY4 423 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 CASD1Q96PB1 797 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 PNMA5Q96PV4 448 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 KIFC3Q9BVG8 833 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 ALG13Q9NP73 1137 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 LRWD1Q9UFC0 647 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 LRFN2Q9ULH4 789 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 KIAA1024Q9UPX6 916 aa12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 PIN4Q9Y237 131 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-207ENST00000481260 ATG2AQ2TAZ0 1938 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 H3BNC9 293 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 GTF2F1P35269 517 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 MBTD1Q05BQ5 628 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 ZRSR1Q15695 479 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 AMHR2Q16671 573 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 PADI6Q6TGC4 694 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 HELQQ8TDG4 1101 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 SNX29Q8TEQ0 813 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 CWH43Q9H720 699 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 C1orf112Q9NSG2 853 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 TYW1Q9NV66 732 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 TMEM161AQ9NX61 479 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 CLIC4Q9Y696 253 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 BRWD1Q9NSI6 2320 aa12.69□□□□□ -0.38
RAPGEF1-207ENST00000481260 NLRC5Q86WI3 1866 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 TSPAN1O60635 241 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 DGAT1O75907 488 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 ITGB1P05556 798 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 STAG3L1P0CL83 205 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 IRS1P35568 1242 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 PHKA2P46019 1235 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 PTENP60484 403 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 SKIV2LQ15477 1246 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 RUSC1Q9BVN2 902 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 EIF2AQ9BY44 585 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 BHMT2Q9H2M3 363 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms