RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CHD1O14646 1710 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 RTKN2Q8IZC4 609 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 RCOR1Q9UKL0 485 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ASXL3Q9C0F0 2248 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 NR3C1P04150 777 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 PSMA3P25788 255 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 KIF23Q02241 960 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ARHGAP18Q8N392 663 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 NGRNQ9NPE2 291 aaKnown RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF772Q68DY9 489 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 FOXP4Q8IVH2 680 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 CDKL3Q8IVW4 592 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 EXT2Q93063 718 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 FOPNLQ96NB1 174 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 RASSF10A6NK89 507 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 SLC26A4O43511 780 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 UNC13DQ70J99 1090 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 NDST4Q9H3R1 872 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 PLAAQ9Y263 795 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 SERPINI2O75830 405 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 CD58P19256 250 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 Q3C1V9 767 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 ANKRD13CQ8N6S4 541 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 HSPH1Q92598 858 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 WARS2Q9UGM6 360 aaKnown RBP10.15□□□□□ -0.78
VEGFA-212ENST00000480614 NFU1Q9UMS0 254 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 ENC1O14682 589 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 RAD51Q06609 339 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 KRT31Q15323 416 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 KCTD1Q719H9 257 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 TEKT4Q8WW24 435 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 GREM2Q9H772 168 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 IP6K2Q9UHH9 426 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 ANAPC7Q9UJX3 599 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 FNDC3AQ9Y2H6 1198 aaKnown RBP10.15□□□□□ -0.78
VEGFA-212ENST00000480614 GTSE1Q9NYZ3 720 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 HLA-DPA1P20036 260 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 DPCR1Q3MIW9 517 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 OR6B3Q8NGW1 331 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 DPYSL4O14531 572 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 ZRANB2O95218 330 aaKnown RBP eCLIP10.15□□□□□ -0.784e-17■■□□□ 11.4
VEGFA-212ENST00000480614 VEPH1Q14D04 833 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 GPC5P78333 572 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 MTERF2Q49AM1 385 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 NLRP1Q9C000 1473 aa10.15□□□□□ -0.78
VEGFA-212ENST00000480614 STK36Q9NRP7 1315 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 MFAP3LO75121 409 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 MAPK6Q16659 721 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 NUP85Q9BW27 656 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 WNT8AQ9H1J5 351 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 SENP1Q9P0U3 644 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 A0A0G2JND7 137 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 WDR91A4D1P6 747 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 KRT87PA6NCN2 255 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 SDC4P31431 198 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 AP3M2P53677 418 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 MRPL28Q13084 256 aaKnown RBP10.15□□□□□ -0.79
VEGFA-212ENST00000480614 TERF2Q15554 542 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 ZBTB41Q5SVQ8 909 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 ATP11CQ8NB49 1132 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 ZWILCHQ9H900 591 aa10.15□□□□□ -0.79
VEGFA-212ENST00000480614 KNTC1P50748 2209 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 GSPT1P15170 499 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 CXCR5P32302 372 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 SLCO1A2P46721 670 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 PRELPP51888 382 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 KRT76Q01546 638 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 TAGAPQ8N103 731 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 PAGE5Q96GU1 130 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ANO9A1A5B4 782 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 H0Y626 953 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 TRIM16O95361 564 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 XXYLT1Q8NBI6 393 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 BFARQ9NZS9 450 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 SFNP31947 248 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 E2F5Q15329 346 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 TSPAN17Q96FV3 270 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 PCDHGB4Q9UN71 923 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 GDF11O95390 407 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 TRADDQ15628 312 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 SCARA5Q6ZMJ2 495 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 GIMAP4Q9NUV9 329 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 FRMD3A2A2Y4 597 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 DIAPH2O60879 1101 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ZBTB33Q86T24 672 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 LINC00301Q8NCQ3 95 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 NEMP1O14524 444 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 RPSAP08865 295 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 HSPA1AP0DMV8 641 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 HSPA1BP0DMV9 641 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ARPP19P56211 112 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 DALRD3Q5D0E6 543 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 SYDE1Q6ZW31 735 aaPredicted RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 KRT27Q7Z3Y8 459 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ENAHQ8N8S7 591 aaPredicted RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF341Q9BYN7 854 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 GINM1Q9NU53 330 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 DENND3A2RUS2 1198 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms