RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CALCOCO2Q13137 446 aa13□□□□□ -0.33
PCCB-214ENST00000478469 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
PCCB-214ENST00000478469 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
PCCB-214ENST00000478469 GLT1D1Q96MS3 346 aa13□□□□□ -0.33
PCCB-214ENST00000478469 RUSC1Q9BVN2 902 aa13□□□□□ -0.33
PCCB-214ENST00000478469 CYP39A1Q9NYL5 469 aa13□□□□□ -0.33
PCCB-214ENST00000478469 CEP72Q9P209 647 aa13□□□□□ -0.33
PCCB-214ENST00000478469 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
PCCB-214ENST00000478469 KBTBD13C9JR72 458 aa13□□□□□ -0.33
PCCB-214ENST00000478469 CIITAP33076 1130 aa13□□□□□ -0.33
PCCB-214ENST00000478469 CFAP221Q4G0U5 840 aa13□□□□□ -0.33
PCCB-214ENST00000478469 ARMCX2Q7L311 632 aa13□□□□□ -0.33
PCCB-214ENST00000478469 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
PCCB-214ENST00000478469 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
PCCB-214ENST00000478469 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.33
PCCB-214ENST00000478469 SLC26A2P50443 739 aa13□□□□□ -0.33
PCCB-214ENST00000478469 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
PCCB-214ENST00000478469 HSPBP1Q9NZL4 362 aa13□□□□□ -0.33
PCCB-214ENST00000478469 EMSYQ7Z589 1322 aa13□□□□□ -0.33
PCCB-214ENST00000478469 RNF8O76064 485 aa13□□□□□ -0.33
PCCB-214ENST00000478469 NDUFA10O95299 355 aa13□□□□□ -0.33
PCCB-214ENST00000478469 BFSP1Q12934 665 aa13□□□□□ -0.33
PCCB-214ENST00000478469 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
PCCB-214ENST00000478469 MAATS1Q7Z4T9 603 aa13□□□□□ -0.33
PCCB-214ENST00000478469 WNK4Q96J92 1243 aa13□□□□□ -0.33
PCCB-214ENST00000478469 NHEJ1Q9H9Q4 299 aaPredicted RBP13□□□□□ -0.33
PCCB-214ENST00000478469 C10orf71Q711Q0 1435 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 IGKV6D-41A0A0C4DH26 115 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 MED7O43513 233 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 DUOXA2Q1HG44 320 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 PPP1R2P3Q6NXS1 205 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 DSTYKQ6XUX3 929 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 RNF180Q86T96 592 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 BEST2Q8NFU1 509 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCCB-214ENST00000478469 AFG1LQ8WV93 481 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 SLC5A5Q92911 643 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 SOWAHDA6NJG2 315 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 CYP27A1Q02318 531 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 ZNF699Q32M78 642 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 C8orf74Q6P047 294 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 ALKBH5Q6P6C2 394 aaKnown RBP12.99□□□□□ -0.33
PCCB-214ENST00000478469 IFT81Q8WYA0 676 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 TRIM11Q96F44 468 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 VTA1Q9NP79 307 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 BCCIPQ9P287 314 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCCB-214ENST00000478469 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
PCCB-214ENST00000478469 A0A1W2PQC6 194 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 MYZAPP0CAP1 466 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 HADHQ16836 314 aaKnown RBP12.99□□□□□ -0.33
PCCB-214ENST00000478469 FBXL13Q8NEE6 735 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.99□□□□□ -0.33
PCCB-214ENST00000478469 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
PCCB-214ENST00000478469 LIMA1Q9UHB6 759 aaKnown RBP12.99□□□□□ -0.33
PCCB-214ENST00000478469 RSPH10B2B2RC85 870 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 CTSHP09668 335 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 RSPH10BP0C881 870 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 KIF11P52732 1056 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 NOGQ13253 232 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 KYAT1Q16773 422 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 DEFB115Q30KQ5 88 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 ZNF365Q70YC5 407 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 FAM149B1Q96BN6 582 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 SPTLC3Q9NUV7 552 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 PRMT7Q9NVM4 692 aaPredicted RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 STIM2Q9P246 746 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 PSMC4P43686 418 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 ACOT2P49753 483 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 TMEM62Q0P6H9 643 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 IFRD2Q12894 506 aaPredicted RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 LY6KQ17RY6 165 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 GPRC5CQ9NQ84 441 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 MTRF1LQ9UGC7 380 aaKnown RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 UBE4BO95155 1302 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 NKRFO15226 690 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCCB-214ENST00000478469 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 TRPA1O75762 1119 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 TCP1P17987 556 aaKnown RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 CLUL1Q15846 466 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 PTPROQ16827 1216 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 ZNF394Q53GI3 561 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 TREML2Q5T2D2 321 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 SCYL2Q6P3W7 929 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 OR6B3Q8NGW1 331 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 ACAP3Q96P50 834 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 KCNK3O14649 394 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 PTGER2P43116 358 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 AP3M2P53677 418 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
PCCB-214ENST00000478469 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 ZNF484Q5JVG2 852 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 ACRBPQ8NEB7 543 aa12.98□□□□□ -0.33
PCCB-214ENST00000478469 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms