RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SNX2O60749 519 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 CLASP2O75122 1294 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 SEMA7AO75326 666 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 CNOT4O95628 575 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 NTRK1P04629 796 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TRIM27P14373 513 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 XBP1P17861 261 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 IL4RP24394 825 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 CCNCP24863 283 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 FPR2P25090 351 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 VIPR1P32241 457 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 HALP42357 657 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 GPR85P60893 370 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 GABREP78334 506 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 APBA1Q02410 837 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TBX2Q13207 712 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PKN1Q16512 942 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PKN2Q16513 984 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 KIZQ2M2Z5 673 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MUM1Q2TAK8 710 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TKFCQ3LXA3 575 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PLEKHN1Q494U1 663 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 ZNF648Q5T619 568 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MROH9Q5TGP6 573 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TMEM132EQ6IEE7 984 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 SWSAP1Q6NVH7 229 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 IRGCQ6NXR0 463 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 ZC3H14Q6PJT7 736 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 KCNT2Q6UVM3 1135 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 UNC5DQ6UXZ4 953 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 EP400NLQ6ZTU2 488 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TOGARAM2Q6ZUX3 1019 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MAMDC2Q7Z304 686 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TMC6Q7Z403 805 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 NLRP10Q86W26 655 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 DGKHQ86XP1 1220 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 HOMER1Q86YM7 354 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 DCP2Q8IU60 420 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 RIOX2Q8IUF8 465 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 ANKRD42Q8N9B4 389 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PTPRN2Q92932 1015 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 KISS1RQ969F8 398 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 CHAMP1Q96JM3 812 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 RMDN2Q96LZ7 410 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MOGAT1Q96PD6 335 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 STRBPQ96SI9 672 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PPP1R16BQ96T49 567 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 UTP14AQ9BVJ6 771 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MRPL9Q9BYD2 267 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MCOLN1Q9GZU1 580 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 IQCGQ9H095 443 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 PRKRIP1Q9H875 184 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 DDX21Q9NR30 783 aaKnown RBP eCLIP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 SIRT5Q9NXA8 310 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MKS1Q9NXB0 559 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TRMT1Q9NXH9 659 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 CLDND1Q9NY35 253 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 FBXO10Q9UK96 956 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 COA3Q9Y2R0 106 aaPredicted RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 RRP15Q9Y3B9 282 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 IPPQ9Y573 584 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 X6R8D5 127 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 SETD1BQ9UPS6 1966 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 ADAMTS12P58397 1594 aa4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 TDRD9Q8NDG6 1382 aaKnown RBP4.02□□□□□ -1.77
FNDC3B-209ENST00000478016 MAGI1Q96QZ7 1491 aaPredicted RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 ZC3H12DA2A288 527 aaKnown RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 SMTNL1A8MU46 457 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 MSCO60682 206 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 TMCC2O75069 709 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 MTRF1O75570 445 aaKnown RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 KIAA0754O94854 1291 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 IFIT2P09913 472 aaKnown RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 VCAM1P19320 739 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 SMARCA1P28370 1054 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 ADD2P35612 726 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 SLC6A11P48066 632 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 PRR5P85299 388 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 SLC9A5Q14940 896 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 WTAPQ15007 396 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 ANO1Q5XXA6 986 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 LMBRD2Q68DH5 695 aaPredicted RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 HIBCHQ6NVY1 386 aaPredicted RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 KSR2Q6VAB6 950 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 LBX2Q6XYB7 198 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 C1orf122Q6ZSJ8 110 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 C16orf86Q6ZW13 317 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 SYDE1Q6ZW31 735 aaPredicted RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 RTL10Q7L3V2 364 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 BEND5Q7L4P6 421 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 MCM10Q7L590 875 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 RASGRP2Q7LDG7 609 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 BHLHE22Q8NFJ8 381 aaPredicted RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 SPATA18Q8TC71 538 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 KCNN1Q92952 543 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 NACC2Q96BF6 587 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 NAF1Q96HR8 494 aaKnown RBP4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 ALG1Q9BT22 464 aa4.01□□□□□ -1.77
FNDC3B-209ENST00000478016 AP5M1Q9H0R1 490 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms