RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 PRRC2BQ5JSZ5 2229 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 TLDC2A0PJX2 215 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 EIF3CLB5ME19 914 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CPLX1O14810 134 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CYTH3O43739 400 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 RTN2O75298 545 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ERLIN2O94905 339 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 RPN1P04843 607 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 MYL3P08590 195 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 PYGBP11216 843 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CYP2C9P11712 490 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ENPP1P22413 925 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 EIF4BP23588 611 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 IL4RP24394 825 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 RPL13P26373 211 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CCT6AP40227 531 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 RANBP1P43487 201 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 FNTAP49354 379 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CPT1AP50416 773 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 PDE4DQ08499 809 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 MAP7Q14244 749 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 DHX8Q14562 1220 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 GPATCH4Q5T3I0 446 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 OLFML1Q6UWY5 402 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 C11orf74Q86VG3 221 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CHD1LQ86WJ1 897 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 PLPP6Q8IY26 295 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ARL10Q8N8L6 244 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ENAHQ8N8S7 591 aaPredicted RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 PNMA1Q8ND90 353 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ANKK1Q8NFD2 765 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 DNERQ8NFT8 737 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 OR6J1Q8NGC5 347 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 UHMK1Q8TAS1 419 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 SCFD2Q8WU76 684 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ESR2Q92731 530 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 COPS5Q92905 334 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 PPP2R3CQ969Q6 453 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ALS2CR12Q96Q35 445 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 EIF3CQ99613 913 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 MRPL46Q9H2W6 279 aaKnown RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 NKX2-4Q9H2Z4 354 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 ACBD3Q9H3P7 528 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 OSBPL3Q9H4L5 887 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 SYNCQ9H7C4 482 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 TCF7L2Q9NQB0 619 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 POLR3EQ9NVU0 708 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 COL20A1Q9P218 1284 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 CARD8Q9Y2G2 431 aa6.48□□□□□ -1.37
TRA2B-211ENST00000477939 COL4A4P53420 1690 aaPredicted RBP6.48□□□□□ -1.37
TRA2B-211ENST00000477939 BRWD1Q9NSI6 2320 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 GTPBP10A4D1E9 387 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 B4E1Z4 1266 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ABLIM1O14639 778 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ZNF213O14771 459 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 NKRFO15226 690 aaKnown RBP eCLIP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 MGEA5O60502 916 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ZNF189O75820 626 aaPredicted RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 FGBP02675 491 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 MYOGP15173 224 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 CASP2P42575 452 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 RABGGTBP53611 331 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 TUBA4AP68366 448 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ZBED6P86452 979 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ROR2Q01974 943 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 CUL4BQ13620 913 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 RAB30Q15771 203 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 KLHL40Q2TBA0 621 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 FAM47CQ5HY64 1035 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 CFAP58Q5T655 872 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 CWC27Q6UX04 472 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 PPP4R3CPQ6ZMV5 832 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 NEK10Q6ZWH5 1172 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 DGKHQ86XP1 1220 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ADGRF4Q8IZF3 695 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 PDCD7Q8N8D1 485 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ZFPM2Q8WW38 1151 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 CTAGE1Q96RT6 745 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 GAS2L1Q99501 681 aaPredicted RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 MTG1Q9BT17 334 aaPredicted RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 OSBPL10Q9BXB5 764 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 IRX2Q9BZI1 471 aaPredicted RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 XPO4Q9C0E2 1151 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 MTIF3Q9H2K0 278 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 TNMDQ9H2S6 317 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 CD248Q9HCU0 757 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 STIM2Q9P246 746 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 MSRAQ9UJ68 235 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 MRPL11Q9Y3B7 192 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 BDP1A6H8Y1 2624 aa6.47□□□□□ -1.37
TRA2B-211ENST00000477939 BAZ2BQ9UIF8 2168 aaKnown RBP6.47□□□□□ -1.37
TRA2B-211ENST00000477939 ZBBXA8MT70 800 aa6.46□□□□□ -1.38
TRA2B-211ENST00000477939 BOLA2-SMG1P6H3BVE0 249 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms