RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 NOSTRINQ8IVI9 506 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 KLHL23Q8NBE8 558 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 ADAMTS19Q8TE59 1207 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 PRPF31Q8WWY3 499 aaKnown RBP15.41■□□□□ 0.06
HDAC7-222ENST00000477937 TMEM143Q96AN5 459 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
HDAC7-222ENST00000477937 TMEM60Q9H2L4 133 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 UBE2ZQ9H832 354 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-222ENST00000477937 ALG13Q9NP73 1137 aaKnown RBP15.41■□□□□ 0.06
HDAC7-222ENST00000477937 ANKEF1Q9NU02 776 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 KIF3AQ9Y496 699 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 PCDHB12Q9Y5F1 795 aa15.41■□□□□ 0.06
HDAC7-222ENST00000477937 EOMESO95936 686 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 ITGB1P05556 798 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 SRGAP2CP0DJJ0 459 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 EMC2Q15006 297 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 ZNF174Q15697 407 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 TTC38Q5R3I4 469 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 CATSPER4Q7RTX7 472 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 RNF169Q8NCN4 708 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 SPPL3Q8TCT6 385 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 UHRF1Q96T88 793 aaPredicted RBP15.4■□□□□ 0.06
HDAC7-222ENST00000477937 MTRQ99707 1265 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 TMEM117Q9H0C3 514 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 IFT122Q9HBG6 1241 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 BMP2KQ9NSY1 1161 aaPredicted RBP15.4■□□□□ 0.06
HDAC7-222ENST00000477937 TYW1Q9NV66 732 aaKnown RBP15.4■□□□□ 0.06
HDAC7-222ENST00000477937 NOL7Q9UMY1 257 aaKnown RBP15.4■□□□□ 0.06
HDAC7-222ENST00000477937 BRWD1Q9NSI6 2320 aa15.4■□□□□ 0.06
HDAC7-222ENST00000477937 POTEMA6NI47 508 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 NCK2O43639 380 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 SKIP12755 728 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDAC7-222ENST00000477937 TECP42680 631 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 TRAPPC10P48553 1259 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 LAMTOR4Q0VGL1 99 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 CSPP1Q1MSJ5 1256 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 TWF2Q6IBS0 349 aaKnown RBP15.39■□□□□ 0.05
HDAC7-222ENST00000477937 SRGAP1Q7Z6B7 1085 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 FERMT3Q86UX7 667 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 ERMNQ8TAM6 284 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 CASD1Q96PB1 797 aa15.39■□□□□ 0.05
HDAC7-222ENST00000477937 PIN4Q9Y237 131 aaKnown RBP15.39■□□□□ 0.05
HDAC7-222ENST00000477937 VCANP13611 3396 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 TNFRSF10AO00220 468 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 DGAT1O75907 488 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 OR52Z1P0C646 297 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 LAG3P18627 525 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 KCNA5P22460 613 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 U2AF2P26368 475 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC7-222ENST00000477937 MCM2P49736 904 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 CAMK1Q14012 370 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 MXD4Q14582 209 aaPredicted RBP15.38■□□□□ 0.05
HDAC7-222ENST00000477937 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
HDAC7-222ENST00000477937 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 POF1BQ8WVV4 589 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 PPP2R3CQ969Q6 453 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 PABPC5Q96DU9 382 aaKnown RBP15.38■□□□□ 0.05
HDAC7-222ENST00000477937 TMX3Q96JJ7 454 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 TBC1D32Q96NH3 1257 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 TRAIPQ9BWF2 469 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 CWH43Q9H720 699 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 TUFT1Q9NNX1 390 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
HDAC7-222ENST00000477937 CSPG5O95196 566 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 SPATA31C1P0DKV0 1188 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 DNAJB1P25685 340 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 PHKA2P46019 1235 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 RARRES1P49788 294 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 UBE3AQ05086 875 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 LEXMQ3ZCV2 418 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 EP400NLQ6ZTU2 488 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 CATSPER3Q86XQ3 398 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 THNSL1Q8IYQ7 743 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 LRRC43Q8N309 656 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 COLGALT1Q8NBJ5 622 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 RNF149Q8NC42 400 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
HDAC7-222ENST00000477937 XPNPEP1Q9NQW7 623 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 HCSTQ9UBK5 93 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 XIRP2A4UGR9 3374 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 CUL9Q8IWT3 2517 aa15.37■□□□□ 0.05
HDAC7-222ENST00000477937 A0A087WWV3 80 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 FGF18O76093 207 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 CD2BP2O95400 341 aaKnown RBP15.36■□□□□ 0.05
HDAC7-222ENST00000477937 ATF7P17544 494 aaPredicted RBP15.36■□□□□ 0.05
HDAC7-222ENST00000477937 RPA1P27694 616 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 RAB27AP51159 221 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 POU5F1BQ06416 359 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 HYAL1Q12794 435 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 TFDP1Q14186 410 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 COL19A1Q14993 1142 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 CLLU1OSQ5K130 101 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 LRRC55Q6ZSA7 311 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 HELQQ8TDG4 1101 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 RSPH1Q8WYR4 309 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 MRPL9Q9BYD2 267 aaKnown RBP15.36■□□□□ 0.05
HDAC7-222ENST00000477937 MINDY3Q9H8M7 445 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms