RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 GPR182O15218 404 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 STBD1O95210 358 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 QARSP47897 775 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 RBM25P49756 843 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 GPC3P51654 580 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 PPP2R5CQ13362 524 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 NBR1Q14596 966 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 RABEP1Q15276 862 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 ZNF174Q15697 407 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 EP400NLQ6ZTU2 488 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 ANO5Q75V66 913 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 RHPN2Q8IUC4 686 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 KSR1Q8IVT5 923 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 TPH2Q8IWU9 490 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 LINC01465Q8N7H1 131 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 CEP170P1Q96L14 293 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 ZSCAN31Q96LW9 406 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 CCDC43Q96MW1 224 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 ADAMTS10Q9H324 1103 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 SH2B1Q9NRF2 756 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 SUCLA2Q9P2R7 463 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 XIRP2A4UGR9 3374 aa9.28□□□□□ -0.92
ERCC8-205ENST00000477893 PRRC2BQ5JSZ5 2229 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 MYH9P35579 1960 aaKnown RBP9.28□□□□□ -0.92
ERCC8-205ENST00000477893 A0A087WZ62 844 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 TBKBP1A7MCY6 615 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 ZBTB39O15060 712 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 TBX3O15119 743 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 DGKIO75912 1065 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 CD2BP2O95400 341 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 P4HBP07237 508 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 STAG3L1P0CL83 205 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 FGFR1P11362 822 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 YWHABP31946 246 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 SARSP49591 514 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 DNM2P50570 870 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 KCNQ1P51787 676 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 HMGN5P82970 282 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 EPHA7Q15375 998 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 TARBP2Q15633 366 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 LONRF3Q496Y0 759 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 XKR9Q5GH70 373 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 FAM102BQ5T8I3 360 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 SLFN12Q8IYM2 578 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 ZNF516Q92618 1163 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 TMEM143Q96AN5 459 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 FDXACB1Q9BRP7 624 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 LLPHQ9BRT6 129 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 NIFKQ9BYG3 293 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 TMEM60Q9H2L4 133 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 TTC12Q9H892 705 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 RC3H2Q9HBD1 1191 aaKnown RBP9.27□□□□□ -0.93
ERCC8-205ENST00000477893 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 CYP26B1Q9NR63 512 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 PCDHB7Q9Y5E2 793 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 SQORQ9Y6N5 450 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 LOXHD1Q8IVV2 1947 aa9.27□□□□□ -0.93
ERCC8-205ENST00000477893 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 EVPLQ92817 2033 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 GRM6O15303 877 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 MAFO75444 373 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 SRGAP2CP0DJJ0 459 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 DARSP14868 501 aaKnown RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 ZSCAN20P17040 1043 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 MRPS5P82675 430 aaKnown RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 SPIRE1Q08AE8 756 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 EMC2Q15006 297 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 PTPROQ16827 1216 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 ODR4Q5SWX8 454 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 MCTP1Q6DN14 999 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 SLC7A3Q8WY07 619 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 SAMD11Q96NU1 681 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 NECAB3Q96P71 396 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 CEP89Q96ST8 783 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 EPAS1Q99814 870 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 EIF2AK1Q9BQI3 630 aaKnown RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 GCOM2Q9BZD3 368 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 ZSWIM4Q9H7M6 989 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 ATP6V0A4Q9HBG4 840 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 ALG13Q9NP73 1137 aaKnown RBP9.26□□□□□ -0.93
ERCC8-205ENST00000477893 RGS18Q9NS28 235 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 PCDHA12Q9UN75 941 aa9.26□□□□□ -0.93
ERCC8-205ENST00000477893 C9IYK1 514 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 H3BNC9 293 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 DKC1O60832 514 aaKnown RBP eCLIP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 LINC00271P0C7V0 271 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 SFPQP23246 707 aaKnown RBP eCLIP9.25□□□□□ -0.93
ERCC8-205ENST00000477893 BMPR1AP36894 532 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 TECP42680 631 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 TCEAL5Q5H9L2 206 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 TTC38Q5R3I4 469 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 SLC24A5Q71RS6 500 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 MAEAQ7L5Y9 396 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 CATSPER4Q7RTX7 472 aa9.25□□□□□ -0.93
ERCC8-205ENST00000477893 NOSTRINQ8IVI9 506 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms