RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GDF9O60383 454 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 GPR32O75388 356 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 RETP07949 1114 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 MS4A1P11836 297 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 KLRC2P26717 231 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 STAT5BP51692 787 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 CSRP2Q16527 193 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 KIZQ2M2Z5 673 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 MCMDC2Q4G0Z9 681 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 LAIR1Q6GTX8 287 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 CELF5Q8N6W0 485 aaKnown RBP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 FAM227BQ96M60 508 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 OSMRQ99650 979 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 FAM126AQ9BYI3 521 aaPredicted RBP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 AZI2Q9H6S1 392 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 PRMT8Q9NR22 394 aaPredicted RBP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 SEMA4GQ9NTN9 838 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 NUMBLQ9Y6R0 609 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 CLUHO75153 1309 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 A0A0D9SFI3 127 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 MAFGO15525 162 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 GALTP07902 379 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 C1QTNF9P0C862 333 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 CHRM1P11229 460 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 TDGF1P13385 188 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 MAGEA9P43362 315 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 PRKCQQ04759 706 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 FZD5Q13467 585 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 SLC44A4Q53GD3 710 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 PRR23CQ6ZRP0 262 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF589Q86UQ0 364 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 HELQQ8TDG4 1101 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 KCNV2Q8TDN2 545 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 MAP4K1Q92918 833 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF707Q96C28 371 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 PPP1R16BQ96T49 567 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 EMILIN2Q9BXX0 1053 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 JPH1Q9HDC5 661 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 LTB4R2Q9NPC1 389 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 UBIAD1Q9Y5Z9 338 aa8.39□□□□□ -1.07
SPTLC1-205ENST00000477888 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 IGKV6D-21A0A0A0MT36 114 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 ZBTB42B2RXF5 422 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 B4E1Z4 1266 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 INPPL1O15357 1258 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 HBP1O60381 514 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 ZC3H11AO75152 810 aaKnown RBP eCLIP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 RFPL2O75678 378 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 ATG7O95352 703 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 ZSCAN20P17040 1043 aaPredicted RBP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 CD72P21854 359 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 RPS9P46781 194 aaKnown RBP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 SLC26A2P50443 739 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 ACTR2P61160 394 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 MTMR1Q13613 665 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 UBXN2BQ14CS0 331 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 MLF2Q15773 248 aaPredicted RBP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 LPAL2Q16609 132 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 ZBTB41Q5SVQ8 909 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 RSPO2Q6UXX9 243 aaPredicted RBP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 RNF169Q8NCN4 708 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 SMARCC2Q8TAQ2 1214 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 FGF14Q92915 247 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 NRDE2Q9H7Z3 1164 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 JADE2Q9NQC1 790 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 MAN1C1Q9NR34 630 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 SLC9A2Q9UBY0 812 aa8.38□□□□□ -1.07
SPTLC1-205ENST00000477888 DENND4AQ7Z401 1863 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF213O14771 459 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 C22orf31O95567 290 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 VTNP04004 478 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 LIMK1P53667 647 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 MTAPQ13126 283 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 SEC23AQ15436 765 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 PARM1Q6UWI2 310 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 UNQ6494/PRO21346Q6UXR6 183 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 RSPH1Q8WYR4 309 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 SMG7Q92540 1137 aaKnown RBP8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 NELL2Q99435 816 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 MYL10Q9BUA6 226 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 TMEM121BQ9BXQ6 578 aaPredicted RBP8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 NT5C3AQ9H0P0 336 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 MRPL17Q9NRX2 175 aaKnown RBP8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 KCNH7Q9NS40 1196 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms