RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ASPSCR1Q9BZE9 553 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 MEGF9Q9H1U4 602 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 SMPD4Q9NXE4 827 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 KCMF1Q9P0J7 381 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 CDC42EP3Q9UKI2 254 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 SLC4A7Q9Y6M7 1214 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 A0A0G2JNJ9 132 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 GABRDO14764 452 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 MAFGO15525 162 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 CUTAO60888 179 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 ENPP1P22413 925 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 POLD1P28340 1107 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 IARSP41252 1262 aaKnown RBP6.7□□□□□ -1.34
PTCD3-211ENST00000476215 TOP3AQ13472 1001 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-211ENST00000476215 FSCN1Q16658 493 aaKnown RBP6.7□□□□□ -1.34
PTCD3-211ENST00000476215 UGT8Q16880 541 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 SLFN13Q68D06 897 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 EAF2Q96CJ1 260 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-211ENST00000476215 SEC61A2Q9H9S3 476 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 Q9UFV3 132 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 EDARQ9UNE0 448 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 MYPNQ86TC9 1320 aa6.7□□□□□ -1.34
PTCD3-211ENST00000476215 OPHN1O60890 802 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 MAFO75444 373 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-211ENST00000476215 CNOT4O95628 575 aaKnown RBP6.69□□□□□ -1.34
PTCD3-211ENST00000476215 MT-CO1P00395 513 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 LPLP06858 475 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 MYBL2P10244 700 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 KCNQ1P51787 676 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 DGKDQ16760 1214 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 ABCB5Q2M3G0 1257 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 PITRM1Q5JRX3 1037 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 TMEM200BQ69YZ2 307 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 IFNL2Q8IZJ0 200 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 CBARPQ8N350 705 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-211ENST00000476215 NOL10Q9BSC4 688 aaKnown RBP6.69□□□□□ -1.34
PTCD3-211ENST00000476215 WNT8AQ9H1J5 351 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 CD248Q9HCU0 757 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 DENND2AQ9ULE3 1009 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 USP18Q9UMW8 372 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 JAG2Q9Y219 1238 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 MYRFQ9Y2G1 1151 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
PTCD3-211ENST00000476215 GPR42O15529 346 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 H2AFYO75367 372 aaKnown RBP6.68□□□□□ -1.34
PTCD3-211ENST00000476215 HMGCRP04035 888 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 PFKMP08237 780 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 GPR3P46089 330 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTCD3-211ENST00000476215 PLEKHG6Q3KR16 790 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 PGM2L1Q6PCE3 622 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 GLB1LQ6UWU2 654 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 ARHGEF18Q6ZSZ5 1173 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 RALYLQ86SE5 291 aaKnown RBP6.68□□□□□ -1.34
PTCD3-211ENST00000476215 AMOTL1Q8IY63 956 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-211ENST00000476215 QRSL1Q9H0R6 528 aaKnown RBP6.68□□□□□ -1.34
PTCD3-211ENST00000476215 SAE1Q9UBE0 346 aaPredicted RBP6.68□□□□□ -1.34
PTCD3-211ENST00000476215 SYNPO2Q9UMS6 1093 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 PCDHB6Q9Y5E3 794 aa6.68□□□□□ -1.34
PTCD3-211ENST00000476215 A0A0A6YYJ9 748 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 ZNF20P17024 532 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 ETV4P43268 484 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 STAT5BP51692 787 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 LGALS4P56470 323 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 ANTXR2P58335 489 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 EIF4HQ15056 248 aaKnown RBP6.67□□□□□ -1.34
PTCD3-211ENST00000476215 INAVAQ3KP66 663 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 BMP8AQ7Z5Y6 402 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 DYDC2Q96IM9 177 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 HIST1H2AHQ96KK5 128 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 HIST1H2AJQ99878 128 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 KCTD10Q9H3F6 313 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 PRDM12Q9H4Q4 367 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 CCM2LQ9NUG4 571 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-211ENST00000476215 DNAJC28Q9NX36 388 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 MKS1Q9NXB0 559 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 TMPRSS11EQ9UL52 423 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 ZDHHC9Q9Y397 364 aa6.67□□□□□ -1.34
PTCD3-211ENST00000476215 SHTN1A0MZ66 631 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 PATE3B3GLJ2 98 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 ALDH1L1O75891 902 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 CFBP00751 764 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 SRSF2Q01130 221 aaKnown RBP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 PPARAQ07869 468 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 TRIM25Q14258 630 aaKnown RBP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 USP10Q14694 798 aaKnown RBP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 CLUL1Q15846 466 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 PTPN21Q16825 1174 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 TOR2AQ5JU69 321 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 GGNQ86UU5 652 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 RTKN2Q8IZC4 609 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 BCL6BQ8N143 479 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 CDYL2Q8N8U2 506 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 C1orf162Q8NEQ5 155 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 GAB3Q8WWW8 586 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms