RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 MRPL43Q8N983 215 aaKnown RBP13.99□□□□□ -0.17
CCDC57-208ENST00000475635 CASP10Q92851 521 aa13.99□□□□□ -0.17
CCDC57-208ENST00000475635 MRPL9Q9BYD2 267 aaKnown RBP13.99□□□□□ -0.17
CCDC57-208ENST00000475635 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
CCDC57-208ENST00000475635 SEPT9Q9UHD8 586 aaPredicted RBP13.99□□□□□ -0.17
CCDC57-208ENST00000475635 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
CCDC57-208ENST00000475635 PTPRZ1P23471 2315 aaPredicted RBP13.99□□□□□ -0.17
CCDC57-208ENST00000475635 MTCL1Q9Y4B5 1905 aaKnown RBP13.99□□□□□ -0.17
CCDC57-208ENST00000475635 PLXNA3P51805 1871 aa13.99□□□□□ -0.17
CCDC57-208ENST00000475635 CFAP54Q96N23 3096 aa13.99□□□□□ -0.17
CCDC57-208ENST00000475635 MYO15AQ9UKN7 3530 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 NT5C1B-RDH14C9J2C7 533 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 CLASP2O75122 1294 aaKnown RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 CA8P35219 290 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 ALDH7A1P49419 539 aaKnown RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 VCPP55072 806 aaKnown RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 BCAR1P56945 870 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 NLRP5P59047 1200 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 CCT2P78371 535 aaKnown RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 MTERF2Q49AM1 385 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 CES5AQ6NT32 575 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 MIER3Q7Z3K6 550 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 TBCKQ8TEA7 893 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 NIFKQ9BYG3 293 aaKnown RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 GCOM2Q9BZD3 368 aaPredicted RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 NCOA5Q9HCD5 579 aaKnown RBP13.98□□□□□ -0.17
CCDC57-208ENST00000475635 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 NR2E1Q9Y466 385 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 HCFC2Q9Y5Z7 792 aa13.98□□□□□ -0.17
CCDC57-208ENST00000475635 RIF1Q5UIP0 2472 aaKnown RBP13.97□□□□□ -0.17
CCDC57-208ENST00000475635 A0A087WZ62 844 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 TMEM150BA6NC51 233 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 PSMD10O75832 226 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 PDIA3P30101 505 aaKnown RBP13.97□□□□□ -0.17
CCDC57-208ENST00000475635 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
CCDC57-208ENST00000475635 Q4G0T1 1027 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 XKR3Q5GH77 459 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 NECTIN4Q96NY8 510 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
CCDC57-208ENST00000475635 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 POMKQ9H5K3 350 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 CHST12Q9NRB3 414 aa13.97□□□□□ -0.17
CCDC57-208ENST00000475635 FAM186AA6NE01 2351 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 ZFHX2Q9C0A1 2572 aaPredicted RBP13.96□□□□□ -0.17
CCDC57-208ENST00000475635 ZC3H11AO75152 810 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC57-208ENST00000475635 STBD1O95210 358 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 TDP2O95551 362 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 CXCL14O95715 111 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 SFPQP23246 707 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC57-208ENST00000475635 PSMA5P28066 241 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 PHKA2P46019 1235 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 DNM2P50570 870 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 EVCP57679 992 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 CDC42EP1Q00587 391 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 ITIH3Q06033 890 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 LONRF3Q496Y0 759 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 TWF2Q6IBS0 349 aaKnown RBP13.96□□□□□ -0.17
CCDC57-208ENST00000475635 TMEM173Q86WV6 379 aaPredicted RBP13.96□□□□□ -0.17
CCDC57-208ENST00000475635 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 LPPQ93052 612 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 C22orf23Q9BZE7 217 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 PCDHA4Q9UN74 947 aa13.96□□□□□ -0.17
CCDC57-208ENST00000475635 DOCK8Q8NF50 2099 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 CYP3A7-CYP3A51PA0A087WV96 503 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 IGKV6-21A0A0C4DH24 114 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-208ENST00000475635 C2CD4DB7Z1M9 353 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 PDGFBP01127 241 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-208ENST00000475635 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 SKIP12755 728 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 CYP3A7P24462 503 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 AVPR2P30518 371 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 B3GNT9Q6UX72 402 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 RHPN2Q8IUC4 686 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 VPS52Q8N1B4 723 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 KREMEN2Q8NCW0 462 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 RSPH1Q8WYR4 309 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 RIPOR3Q96MK2 946 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 ZBP1Q9H171 429 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-208ENST00000475635 PIN4Q9Y237 131 aaKnown RBP13.95□□□□□ -0.18
CCDC57-208ENST00000475635 VPS13AQ96RL7 3174 aa13.95□□□□□ -0.18
CCDC57-208ENST00000475635 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
CCDC57-208ENST00000475635 MTHFRP42898 656 aa13.94□□□□□ -0.18
CCDC57-208ENST00000475635 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
CCDC57-208ENST00000475635 MTMR3Q13615 1198 aa13.94□□□□□ -0.18
CCDC57-208ENST00000475635 RARS2Q5T160 578 aaKnown RBP13.94□□□□□ -0.18
CCDC57-208ENST00000475635 GLB1LQ6UWU2 654 aa13.94□□□□□ -0.18
CCDC57-208ENST00000475635 DDX53Q86TM3 631 aaKnown RBP13.94□□□□□ -0.18
CCDC57-208ENST00000475635 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
CCDC57-208ENST00000475635 BLIDQ8IZY5 108 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms