RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 FAM126BQ8IXS8 530 aa6.91□□□□□ -1.3
SDHB-205ENST00000475506 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
SDHB-205ENST00000475506 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.91□□□□□ -1.3
SDHB-205ENST00000475506 VPS37AQ8NEZ2 397 aa6.91□□□□□ -1.3
SDHB-205ENST00000475506 OR2I1PQ8NGU4 316 aa6.91□□□□□ -1.3
SDHB-205ENST00000475506 TOE1Q96GM8 510 aaKnown RBP6.91□□□□□ -1.3
SDHB-205ENST00000475506 CGRRF1Q99675 332 aa6.91□□□□□ -1.3
SDHB-205ENST00000475506 APOL5Q9BWW9 433 aa6.91□□□□□ -1.3
SDHB-205ENST00000475506 PITHD1Q9GZP4 211 aaPredicted RBP6.91□□□□□ -1.3
SDHB-205ENST00000475506 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
SDHB-205ENST00000475506 ZNF839A8K0R7 811 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 NUDT19A8MXV4 375 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 PQBP1O60828 265 aaKnown RBP6.9□□□□□ -1.3
SDHB-205ENST00000475506 OPHN1O60890 802 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 ZBTB7AO95365 584 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 HTR1BP28222 390 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 ARL4AP40617 200 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 WASP42768 502 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 TM4SF4P48230 202 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 TRAPPC10P48553 1259 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 AGFG1P52594 562 aaKnown RBP6.9□□□□□ -1.3
SDHB-205ENST00000475506 PFKPQ01813 784 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 DSC2Q02487 901 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 PPP3CAQ08209 521 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 SNX17Q15036 470 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 CR1LQ2VPA4 569 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 INTS5Q6P9B9 1019 aaKnown RBP6.9□□□□□ -1.3
SDHB-205ENST00000475506 APBB1IPQ7Z5R6 666 aaPredicted RBP6.9□□□□□ -1.3
SDHB-205ENST00000475506 LILRA2Q8N149 483 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 GAB3Q8WWW8 586 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 RSAD2Q8WXG1 361 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 MYLIPQ8WY64 445 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 KAT5Q92993 513 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 TSPAN17Q96FV3 270 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 FDXACB1Q9BRP7 624 aaPredicted RBP6.9□□□□□ -1.3
SDHB-205ENST00000475506 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 NLRC4Q9NPP4 1024 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 PLCB1Q9NQ66 1216 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 INCENPQ9NQS7 918 aa6.9□□□□□ -1.3
SDHB-205ENST00000475506 MBNL3Q9NUK0 354 aaKnown RBP6.9□□□□□ -1.3
SDHB-205ENST00000475506 A0A0A6YYJ9 748 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 CCDC189A1A4V9 331 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 MCAMP43121 646 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 FAM193AP78312 1265 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 SLC9A5Q14940 896 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 INO80DQ53TQ3 878 aaPredicted RBP6.89□□□□□ -1.31
SDHB-205ENST00000475506 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 DTX1Q86Y01 620 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 FAM186BQ8IYM0 893 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 FAM26EQ8N5C1 309 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 FLCNQ8NFG4 579 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 FATE1Q969F0 183 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 CCDC120Q96HB5 630 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 TBCBQ99426 244 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 MYD88Q99836 296 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.89□□□□□ -1.31
SDHB-205ENST00000475506 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 DBR1Q9UK59 544 aaKnown RBP6.89□□□□□ -1.31
SDHB-205ENST00000475506 DMTF1Q9Y222 760 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 PCDHB6Q9Y5E3 794 aa6.89□□□□□ -1.31
SDHB-205ENST00000475506 KLRG2A4D1S0 409 aaPredicted RBP6.88□□□□□ -1.31
SDHB-205ENST00000475506 DTNBO60941 627 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 COBLO75128 1261 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 PPFIA4O75335 1185 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 TCEA3O75764 348 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 SPINK2P20155 84 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 PLEKHN1Q494U1 663 aaPredicted RBP6.88□□□□□ -1.31
SDHB-205ENST00000475506 LMBR1LQ6UX01 489 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 TMEM151AQ8N4L1 468 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 PLBD2Q8NHP8 589 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 TNIP3Q96KP6 325 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 KLHL14Q9P2G3 628 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 FTSJ1Q9UET6 329 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
SDHB-205ENST00000475506 YBX2Q9Y2T7 364 aaKnown RBP6.88□□□□□ -1.31
SDHB-205ENST00000475506 A0A0A6YYK5 440 aaPredicted RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 ABHD14A-ACY1A0A1B0GW23 586 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 GSPT1P15170 499 aaKnown RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 PEX2P28328 305 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 MAP2K6P52564 334 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 NR1I3Q14994 352 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 CNN3Q15417 329 aaKnown RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 RNF220Q5VTB9 566 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 DARS2Q6PI48 645 aaKnown RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 C1orf228Q6PIY5 440 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 BTNL9Q6UXG8 535 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 IFNL2Q8IZJ0 200 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 ENAHQ8N8S7 591 aaPredicted RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 CDYL2Q8N8U2 506 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 GLB1L3Q8NCI6 653 aaPredicted RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 CALML6Q8TD86 181 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 IGDCC4Q8TDY8 1250 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 RPGRQ92834 1020 aaKnown RBP6.87□□□□□ -1.31
SDHB-205ENST00000475506 SGCZQ96LD1 299 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 SYT3Q9BQG1 590 aa6.87□□□□□ -1.31
SDHB-205ENST00000475506 NOL10Q9BSC4 688 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms