RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 TBC1D8BQ0IIM8 1120 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 CCDC73Q6ZRK6 1079 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 SLC24A5Q71RS6 500 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 KRI1Q8N9T8 703 aaKnown RBP17.43■□□□□ 0.38
CPSF3-203ENST00000475482 BANK1Q8NDB2 785 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 C1orf112Q9NSG2 853 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 WRAP73Q9P2S5 460 aaPredicted RBP17.43■□□□□ 0.38
CPSF3-203ENST00000475482 PCDHA7Q9UN72 937 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 PCDHB6Q9Y5E3 794 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 MAFO75444 373 aaPredicted RBP17.42■□□□□ 0.38
CPSF3-203ENST00000475482 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
CPSF3-203ENST00000475482 BMP1P13497 986 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 DRP2Q13474 957 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 GPM6BQ13491 265 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 BTG3Q14201 252 aaPredicted RBP17.42■□□□□ 0.38
CPSF3-203ENST00000475482 EPHA7Q15375 998 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 SLFN12Q8IYM2 578 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 PPP1R16BQ96T49 567 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 ADAM2Q99965 735 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 SEPT9Q9UHD8 586 aaPredicted RBP17.42■□□□□ 0.38
CPSF3-203ENST00000475482 AKT3Q9Y243 479 aa17.42■□□□□ 0.38
CPSF3-203ENST00000475482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 WNT7AO00755 349 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 LETM1O95202 739 aaPredicted RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 TFF2Q03403 129 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 COL19A1Q14993 1142 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 ZNF174Q15697 407 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 PTPROQ16827 1216 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 AAK1Q2M2I8 961 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 MTERF2Q49AM1 385 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 ARL6IP4Q66PJ3 421 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 CAVIN1Q6NZI2 390 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 C4orf19Q8IY42 314 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 PLVAPQ9BX97 442 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 ELAC1Q9H777 363 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 PPME1Q9Y570 386 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
CPSF3-203ENST00000475482 BDP1A6H8Y1 2624 aa17.41■□□□□ 0.38
CPSF3-203ENST00000475482 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 CMA1P23946 247 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 MARCKSP29966 332 aaPredicted RBP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 MCM7P33993 719 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 ATP2C1P98194 919 aaPredicted RBP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 NAALADL2Q58DX5 795 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 P2RX5Q93086 422 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 HLA-CQ95604 372 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 SH2D3AQ9BRG2 576 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 C11orf84Q9BUA3 381 aaPredicted RBP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 LMAN2LQ9H0V9 348 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 CYP26B1Q9NR63 512 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
CPSF3-203ENST00000475482 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
CPSF3-203ENST00000475482 DENND3A2RUS2 1198 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 CTNNB1P35222 781 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 GATMP50440 423 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 PTGDRQ13258 359 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 TIGD5Q53EQ6 642 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 CCDC183Q5T5S1 534 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 HSD17B14Q9BPX1 270 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 LXNQ9BS40 222 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 DHX33Q9H6R0 707 aaKnown RBP17.39■□□□□ 0.37
CPSF3-203ENST00000475482 TMEM161AQ9NX61 479 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 FAM13BQ9NYF5 915 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 RGL1Q9NZL6 768 aa17.39■□□□□ 0.37
CPSF3-203ENST00000475482 GRM6O15303 877 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 SLITRK3O94933 977 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 LYPLA2O95372 231 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 PRPHP41219 470 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 KCNQ1P51787 676 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 NPEPPSP55786 919 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 CAMK1Q14012 370 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 PLA2G4FQ68DD2 849 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 ZNF410Q86VK4 478 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 FSIP1Q8NA03 581 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 JPH2Q9BR39 696 aaPredicted RBP17.38■□□□□ 0.37
CPSF3-203ENST00000475482 ZSWIM4Q9H7M6 989 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 LRFN2Q9ULH4 789 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 PCDHA12Q9UN75 941 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 PLAGL2Q9UPG8 496 aa17.38■□□□□ 0.37
CPSF3-203ENST00000475482 NEMFO60524 1076 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 YWHABP31946 246 aaKnown RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 DNM2P50570 870 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 CALCRLQ16602 461 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
CPSF3-203ENST00000475482 FAM102BQ5T8I3 360 aa17.37■□□□□ 0.37
CPSF3-203ENST00000475482 EXOC8Q8IYI6 725 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms