RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 DISC1Q9NRI5 854 aa23.1■■□□□ 1.29
VPS36-203ENST00000475375 FAM217BQ9NTX9 383 aaPredicted RBP23.1■■□□□ 1.29
VPS36-203ENST00000475375 PROB1E7EW31 1015 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 CHMP2AO43633 222 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 ZNF862O60290 1169 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 IRX6P78412 446 aaPredicted RBP23.09■■□□□ 1.29
VPS36-203ENST00000475375 LONRF3Q496Y0 759 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 ZNF598Q86UK7 904 aaKnown RBP23.09■■□□□ 1.29
VPS36-203ENST00000475375 ZMYND12Q9H0C1 365 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 VPS13AQ96RL7 3174 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 MYO10Q9HD67 2058 aa23.09■■□□□ 1.29
VPS36-203ENST00000475375 ESYT2A0FGR8 921 aa23.08■■□□□ 1.29
VPS36-203ENST00000475375 EPCAMP16422 314 aa23.08■■□□□ 1.29
VPS36-203ENST00000475375 ADD1P35611 737 aaKnown RBP23.08■■□□□ 1.29
VPS36-203ENST00000475375 KIAA1841Q6NSI8 718 aa23.08■■□□□ 1.29
VPS36-203ENST00000475375 ZDHHC14Q8IZN3 488 aa23.08■■□□□ 1.29
VPS36-203ENST00000475375 PLCD3Q8N3E9 789 aa23.08■■□□□ 1.29
VPS36-203ENST00000475375 GCOM2Q9BZD3 368 aaPredicted RBP23.08■■□□□ 1.29
VPS36-203ENST00000475375 ZBP1Q9H171 429 aa23.08■■□□□ 1.29
VPS36-203ENST00000475375 CCDC196A0A1B0GTZ2 297 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 PRR23AA6NEV1 266 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 GAS7O60861 476 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 GNA11P29992 359 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 RNASELQ05823 741 aaKnown RBP23.07■■□□□ 1.28
VPS36-203ENST00000475375 UGCGQ16739 394 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 ADCK5Q3MIX3 580 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 TWF2Q6IBS0 349 aaKnown RBP23.07■■□□□ 1.28
VPS36-203ENST00000475375 TMC5Q6UXY8 1006 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 CABP7Q86V35 215 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 TMEM173Q86WV6 379 aaPredicted RBP23.07■■□□□ 1.28
VPS36-203ENST00000475375 INPP5FQ9Y2H2 1132 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 PLXNA3P51805 1871 aa23.07■■□□□ 1.28
VPS36-203ENST00000475375 SPTBN4Q9H254 2564 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 RIF1Q5UIP0 2472 aaKnown RBP23.06■■□□□ 1.28
VPS36-203ENST00000475375 NBL1P41271 181 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 PHKA2P46019 1235 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 RCAN1P53805 252 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 GIT2Q14161 759 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 GLB1LQ6UWU2 654 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 FLCNQ8NFG4 579 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 LPPQ93052 612 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 GBP3Q9H0R5 595 aa23.06■■□□□ 1.28
VPS36-203ENST00000475375 SEPT9Q9UHD8 586 aaPredicted RBP23.06■■□□□ 1.28
VPS36-203ENST00000475375 SFPQP23246 707 aaKnown RBP eCLIP23.05■■□□□ 1.28
VPS36-203ENST00000475375 CIITAP33076 1130 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 JAK3P52333 1124 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 POLGP54098 1239 aaPredicted RBP23.05■■□□□ 1.28
VPS36-203ENST00000475375 AKAP17AQ02040 695 aaKnown RBP23.05■■□□□ 1.28
VPS36-203ENST00000475375 KRT32Q14532 448 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 MTERF2Q49AM1 385 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 FRMD5Q7Z6J6 570 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 DDX53Q86TM3 631 aaKnown RBP23.05■■□□□ 1.28
VPS36-203ENST00000475375 RASEFQ8IZ41 740 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 BICD2Q8TD16 824 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 ACSF2Q96CM8 615 aaPredicted RBP23.05■■□□□ 1.28
VPS36-203ENST00000475375 IGSF21Q96ID5 467 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 CCDC136Q96JN2 1154 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 TEKT3Q9BXF9 490 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 CYP26B1Q9NR63 512 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 CHST12Q9NRB3 414 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 PIN4Q9Y237 131 aaKnown RBP23.05■■□□□ 1.28
VPS36-203ENST00000475375 USTQ9Y2C2 406 aa23.05■■□□□ 1.28
VPS36-203ENST00000475375 CARNS1A5YM72 827 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 MSH4O15457 936 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 CTSAP10619 480 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 SFNP31947 248 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 DNM2P50570 870 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 CLCN5P51795 746 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 FOXK2Q01167 660 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 DRP2Q13474 957 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 LRCH2Q5VUJ6 765 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 NKD2Q969F2 451 aaPredicted RBP23.04■■□□□ 1.28
VPS36-203ENST00000475375 LENG9Q96B70 501 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 UNC45AQ9H3U1 944 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 TBC1D13Q9NVG8 400 aa23.04■■□□□ 1.28
VPS36-203ENST00000475375 HMGB1P09429 215 aaKnown RBP23.03■■□□□ 1.28
VPS36-203ENST00000475375 SKIP12755 728 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 CDC42EP1Q00587 391 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 NOMO2Q5JPE7 1267 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 CCDC149Q6ZUS6 474 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 PPFIBP1Q86W92 1011 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 SLC22A17Q8WUG5 538 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 RSPH1Q8WYR4 309 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 RIT2Q99578 217 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 NRDE2Q9H7Z3 1164 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 SFXN1Q9H9B4 322 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 IRAK3Q9Y616 596 aa23.03■■□□□ 1.28
VPS36-203ENST00000475375 A0A087WZ62 844 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 SSBP05455 408 aaKnown RBP eCLIP23.02■■□□□ 1.28
VPS36-203ENST00000475375 OTOP3Q7RTS5 596 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 MIER3Q7Z3K6 550 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 CCDC148Q8NFR7 591 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 BCL7CQ8WUZ0 217 aaPredicted RBP23.02■■□□□ 1.28
VPS36-203ENST00000475375 PHKBQ93100 1093 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 GJA10Q969M2 543 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 FDXACB1Q9BRP7 624 aaPredicted RBP23.02■■□□□ 1.28
VPS36-203ENST00000475375 INO80BQ9C086 356 aaPredicted RBP23.02■■□□□ 1.28
VPS36-203ENST00000475375 FBXL21Q9UKT6 434 aa23.02■■□□□ 1.28
VPS36-203ENST00000475375 FAM186AA6NE01 2351 aa23.01■■□□□ 1.27
VPS36-203ENST00000475375 TMEM150BA6NC51 233 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms